Job Description P0A7E5 Confidence 93.99% Date Thu Jan 5 11:05:30 GMT 2012 Rank 74 Aligned Residues 115 % Identity 22% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		T	T	N	Y	I	F	V	T	G	G	V	V	S	S	L	G	K	G	I	A	A	A	S	L	A	A	I	L	E	A	R	G	L	N	V	T	I	M	K	L	D	P	Y	I	N	V	D	P	G	T	M	S	P	I	Q	H	G	E	.	.	.	.	.	V	F	V	T	E	D	G	A	E	T	D	L	D	L	G	H	Y
Query Conservation																																																												.	.	.	.	.
Alig confidence													.	.																															.	.														.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation													.	.																															.	.																													.	.	.	.	.	.	.
Template Sequence		D	R	N	L	W	F	L	V	G	L	Q	.	.	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	.	.	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	.	.	.	.	.	.	.
Template Known Secondary structure		S	S								S	T	.	.	T	S	S														T	T	T											S	.	.	S	T	T													T								T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.																															.	.																													.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		E	R	F	I	R	T	K	M	S	R	R	N	N	F	T	T	G	R	I	Y	S	D	V	L	R	K	E	R	R	G	D	Y	L	G	A	T	V	Q	V	I	P	H	I	T	N	A	I	K	E	R	V	L	E	G	.	G	E	G	H	D	V	V	L	V	E	I	G	G	T	V	G	D	I	E	S	L	P	F	L	E
Query Conservation																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G	.	.	R	L	Q	I	D	E	P	L	M	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T											.	.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
																																													166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R	Q	M	A	V	E	I	G	R	E	H	T	L	F	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	A	R	L	K	E	V	L	G	P	D	E	V	L	L	V
Template Known Secondary structure													S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions