Job Description P0A7E5 Confidence 99.47% Date Thu Jan 5 11:05:30 GMT 2012 Rank 45 Aligned Residues 188 % Identity 15% Template c2h2wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homoserine o-succinyltransferase; PDBTitle: crystal structure of homoserine o-succinyltransferase (ec 2.3.1.46)2 (homoserine o-transsuccinylase) (hts) (tm0881) from thermotoga3 maritima at 2.52 a resolution Resolution 2.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.													.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	V	T	I	G	M	V	G	K	Y	I	E	L	P	D	A	Y	K	S	V	I	E	A	L	K	H	G	G	L	K	N	R	V	S	V	N	I	K	L	I	D	S	Q	D	V	E	T	R	G	V	E	I	L	K	G	L	.	.	.	.	.	.	.	.	.	.	.	.	D	A	I	L	V	P	G	G	F	G	Y
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		R	P	L	E	I	L	I	L	N	L	M	P	D	K	I	K	T	E	I	Q	L	L	R	L	L	G	.	.	N	T	P	L	Q	V	N	V	T	L	L	Y	T	E	T	H	K	P	K	H	T	P	I	E	H	I	L	K	F	Y	T	T	F	S	A	V	K	D	R	K	F	D	G	F	I	I	T	G	A	P	V	E
Template Known Secondary structure													S	S														.	.	S	S	S	S										S						S	S										B		G	G	G	T	T	T												S		T
Template Predicted Secondary structure																												.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
									356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	R	G	V	E	G	M	I	T	T	A	R	F	A	R	E	N	N	I	P	Y	L	G	I	C	L	G	M	Q	V	A	L	I	D	Y	A	R	H	V	A	N	M	E	N	A	N	S	T	E	F	V	P	D	C	K	Y	P	V	V	A	L	I	T	E	W	R	D	E	N	G	N	V	E	V
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	P	F	E	E	V	D	Y	W	E	E	L	T	E	I	M	E	W	S	R	H	N	V	Y	S	T	M	F	I	C	W	A	A	Q	A	G	L	Y	Y	F	Y	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S		G	G	G	S	T	T																						T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	E	K	S	D	L	G	G	T	M	R	L	G	A	Q	Q	C	Q	L	V	D	D	S	L	V	R	Q	L	Y	N	A	P	T	I	V	E	R	H	R	H	R	Y	E	V	N	N	M	L	L	K	Q	I	E	D	A	G	L	R	V	A	G	R	S	G	D	D	Q	L	V	E	I	I	E	V	P	N	H	P	W
Query Conservation
Alig confidence		.	.	.	.																												.																					.	.														.
Template Conservation		.	.	.	.																												.																					.	.														.
Template Sequence		.	.	.	.	K	Y	E	L	P	Q	K	L	S	G	V	Y	K	H	R	V	A	K	D	S	V	L	F	R	G	H	D	.	D	F	F	W	A	P	H	S	R	Y	T	E	V	K	K	E	D	I	D	K	.	.	V	P	E	L	E	I	L	A	E	S	D	E	A	.	G	V	Y	V	V	A	N	K	S	E	R	Q
Template Known Secondary structure		.	.	.	.																	S	S			G	G	G	T	T			.	S																		T	T	.	.		T	T								T	T	T	.								S	S	S	S
Template Predicted Secondary structure		.	.	.	.																												.																					.	.														.
Template SS confidence
						157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	A	C	Q	F	H	P	E	F	T	S	T
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		I	.	F	V	T	G	H	P	E	Y	D	R	Y
Template Known Secondary structure			.				S		T	T			T	T
Template Predicted Secondary structure			.
Template SS confidence
		229		230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions