 |
Job Description | P0A7E5 | Confidence | 87.93% | Date | Thu Jan 5 11:05:30 GMT 2012 |
Rank | 117 | Aligned Residues | 87 |
% Identity | 26% | Template | c2f1rA_ |
PDB info |
PDB header:biosynthetic protein | Chain: A: PDB Molecule:molybdopterin-guanine dinucleotide biosynthesis |
PDBTitle: crystal structure of molybdopterin-guanine biosynthesis2 protein b (mobb)
|
Resolution | 2.10 Å |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | F | V | T | G | G | V | V | S | S | L | G | K | G | I | A | A | A | S | L | A | A | I | L | E | A | R | G | L | N | V | T | I | M | K | L | . |
D | P | Y | I | N | V | D | P | G | T | M | S | P | I | Q | . |
. |
H | G | E | V | F | V | T | E | D | G | A | E | T | D | L | D | L | G | H | Y | E | R | F | I | R | T |
Query Conservation |   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|   |   |
|
|   |
|   |
|
|
|   |   |
|   |   |
|   |   |   |
|   | . |
|
|
|
|
|   |
|   |
|
|
|
|
|   |
| . | . |
|
|
|
|
|
|   |   |
|
|   |
|   |
|
|
|
|
|   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
|   |
| . | . |   |   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
L | S | I | V | G | . |
. |
T | S | D | S | G | K | T | T | L | I | T | R | M | M | P | I | L | R | E | R | G | L | R | V | A | V | V | K | R | K | D | S | W | K | I | Y | N | S | G | A | D | V | V | I | A | S | P | V | K | L | A | F | I | R | R | V | S | E | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
| S | S |
|  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | |
|
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | M | S | R | R | N | N | F | T | T | G | R | I | Y | S | D | V | L | R | K | E | R | R | G | D | Y | L | G | A | T | V | Q | V | I | P | H | I | T | N | A | I | K | E | R | V | L | E | G | G | E | G | H | D | V | V | L | V | E | I | G | G | T |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | N | D | L | D | W | I | Y | E | R | Y | L | S | D | Y | D | L | V | I | T | E | G | F | S | K |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  | T |
|  |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  |  | S |
| G | G |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|