Job Description P0A7E5 Confidence 100.00% Date Thu Jan 5 11:05:30 GMT 2012 Rank 3 Aligned Residues 502 % Identity 54% Template c1vcnA_ PDB info PDB header:ligase Chain: A: PDB Molecule:ctp synthetase; PDBTitle: crystal structure of t.th. hb8 ctp synthetase complex with sulfate2 anion Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	N	Y	I	F	V	T	G	G	V	V	S	S	L	G	K	G	I	A	A	A	S	L	A	A	I	L	E	A	R	G	L	N	V	T	I	M	K	L	D	P	Y	I	N	V	D	P	G	T	M	S	P	I	Q	H	G	E	V	F	V	T	E	D	G	A	E	T	D	L	D	L	G	H	Y	E	R	F	I	R
Query Conservation
Alig confidence																																																					.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		P	R	K	Y	V	F	I	T	G	G	V	V	S	S	L	G	K	G	I	L	T	S	S	L	G	A	L	L	R	A	R	G	Y	R	V	T	A	I	K	I	D	P	Y	V	N	V	D	A	G	T	M	.	.	.	.	.	G	E	V	F	V	T	A	D	G	A	E	T	D	L	D	I	G	H	Y	E	R	F	L	D
Template Known Secondary structure												S	S	S		S	S														T	T	T											S	S		S	S	S	T	T		.	.	.	.	.							T	T						T										T
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		T	K	M	S	R	R	N	N	F	T	T	G	R	I	Y	S	D	V	L	R	K	E	R	R	G	D	Y	L	G	A	T	V	Q	V	I	P	H	I	T	N	A	I	K	E	R	V	L	E	G	G	E	.	.	G	H	D	V	V	L	V	E	I	G	G	T	V	G	D	I	E	S	L	P	F	L	E	A	I	R	Q
Query Conservation																																																					.	.
Alig confidence																																																					.	.
Template Conservation
Template Sequence		M	D	L	S	R	G	N	N	L	T	T	G	Q	V	Y	L	S	V	I	Q	K	E	R	R	G	E	Y	L	S	Q	T	V	Q	V	I	P	H	I	T	D	E	I	K	E	R	I	R	K	V	A	E	E	Q	K	A	E	I	V	V	V	E	V	G	G	T	V	G	D	I	E	S	L	P	F	L	E	A	I	R	Q
Template Known Secondary structure						G	G	G																	T	T	T	T	T	T					T	T	T																	T	T		S								S		T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	V	E	I	G	R	E	H	T	L	F	M	H	L	T	L	V	P	Y	M	A	A	S	G	E	V	K	T	K	P	T	Q	H	S	V	K	E	L	L	S	I	G	I	Q	P	D	I	L	I	C	R	S	D	R	A	V	P	A	N	E	R	A	K	I	A	L	F	C	N	V	P	E	K	A	V	I	S	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	F	D	E	G	E	G	N	T	L	Y	L	H	L	T	L	V	P	Y	L	E	T	S	E	E	F	K	T	K	P	T	Q	H	S	V	A	T	L	R	G	V	G	I	Q	P	D	I	L	V	L	R	S	A	R	P	V	P	E	E	V	R	R	K	V	A	L	F	T	N	V	R	P	G	H	V	F	S	S	P
Template Known Secondary structure								T	T	S													T	T	T	T																	T	T				S							S	S													T	T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	D	S	I	Y	K	I	P	G	L	L	K	S	Q	G	L	D	D	Y	I	C	K	R	F	S	L	N	C	P	E	A	N	L	S	E	W	E	Q	V	I	F	E	E	A	N	P	V	S	E	V	T	I	G	M	V	G	K	Y	I	E	L	P	D	A	Y	K	S	V	I	E	A	L	K	H	G	G	L	K	N
Query Conservation
Alig confidence				.																																										.															.	.	.	.
Template Conservation				.																																										.															.	.	.	.
Template Sequence		T	V	.	H	L	Y	E	V	P	L	L	L	E	E	Q	G	L	G	R	A	V	E	R	A	L	G	L	E	A	V	I	P	N	L	S	F	W	Q	E	A	V	R	V	L	.	H	P	E	R	T	V	K	I	A	I	A	G	K	P	.	.	.	.	D	A	Y	L	S	L	L	E	A	L	R	H	A	G	I	K	N
Template Known Secondary structure				.		T	T										T									T	T																			.			S												.	.	.	.	G	G	G														T
Template Predicted Secondary structure				.																																										.															.	.	.	.
Template SS confidence
		251	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	S	V	N	I	K	L	I	D	S	Q	D	V	E	T	R	G	V	E	I	L	K	G	L	D	A	I	L	V	P	G	G	F	G	Y	R	G	V	E	G	M	I	T	T	A	R	F	A	R	E	N	N	I	P	Y	L	G	I	C	L	G	M	Q	V	A	L	I	D	Y	A	R	H	V	A	N	M	E	N	A
Query Conservation
Alig confidence														.	.	.																				.	.
Template Conservation														.	.	.																				.	.
Template Sequence		R	A	R	V	E	V	K	W	V	D	A	A	.	.	.	A	D	L	D	E	A	F	R	D	V	S	G	I	L	V	P	G	G	V	.	.	R	G	I	E	G	K	V	R	A	A	Q	Y	A	R	E	R	K	I	P	Y	L	G	I	C	L	G	L	Q	I	A	V	I	E	F	A	R	N	V	A	G	L	K	G	A
Template Known Secondary structure		T												.	.	.		T					T	T	T		S									.	.																T	T							T														T	S			T	T
Template Predicted Secondary structure														.	.	.																				.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	T	E	F	V	P	D	C	K	Y	P	V	V	A	L	I	T	E	W	R	D	E	N	G	N	V	E	V	R	S	E	K	S	D	L	G	G	T	M	R	L	G	A	Q	Q	C	Q	L	V	D	D	S	L	V	R	Q	L	Y	N	A	P	T	I	V	E	R	H	R	H	R	Y	E	V	N	N	M	L	L	K
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	S	T	E	F	D	P	H	T	P	H	P	V	I	D	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	M	R	L	G	D	W	P	M	R	I	K	P	G	T	L	L	H	R	L	Y	G	K	E	E	V	L	E	R	H	R	H	R	Y	E	V	N	P	L	Y	V	D
Template Known Secondary structure				T	T	T		T	T		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	S								S	S									S					G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.																						.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.			.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		Q	I	E	D	A	G	L	R	V	A	G	R	S	G	D	.	.	D	Q	L	V	E	I	I	E	V	P	N	H	P	W	F	V	A	C	Q	F	H	P	E	F	T	S	T	P	R	D	G	H	P	L	F	A	G	F	V	K	A	A	S	E	F	Q
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		G	L	E	R	A	G	L	V	V	S	A	T	T	P	G	M	G	A	G	L	V	E	A	I	E	L	K	D	H	P	F	F	L	G	L	Q	S	H	P	E	F	K	S	R	P	M	R	P	S	P	P	F	V	G	F	V	E	A	A	L	A	Y	Q
Template Known Secondary structure						T	T																					T	T	S	S						S	S		G	G	G	G		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.