Job Description P76219 Confidence 9.36% Date Thu Jan 5 12:20:43 GMT 2012 Rank 5 Aligned Residues 144 % Identity 12% Template c3rkoN_ PDB info PDB header:oxidoreductase Chain: N: PDB Molecule:nadh-quinone oxidoreductase subunit n; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		F	L	F	A	C	L	I	F	A	L	V	I	Y	A	I	H	A	F	G	L	F	D	L	L	T	D	L	P	H	L	Q	T	L	I	R	Q	S	G	F	F	G	Y	S	L	Y	I	L	L	F	I	I	A	T	L	L	L	L	P	G	.	.	.	S	I	L	V	I	A	G	G	I	V	F	G	P	L	L	G	T	L
Query Conservation																																																													.	.	.
Alig confidence																																																													.	.	.
Template Conservation
Template Sequence		Y	L	F	S	S	L	G	A	F	G	V	V	S	L	M	S	S	P	Y	R	G	P	D	A	D	S	L	F	S	Y	R	G	L	F	W	H	R	P	I	L	A	A	V	M	T	V	M	M	L	S	L	A	G	I	P	M	T	L	G	F	I	G	K	F	Y	V	L	A	V	G	V	Q	A	H	L	W	W	L	V	G
Template Known Secondary structure																			S			S	S				B	G	G	G		S	S		T	T	T	S														T	T	T		T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	I	A	A	T	L	A	S	S	C	S	F	L	L	A	R	W	L	G	R	D	L	L	L	K	Y	V	G	H	S	N	T	F	Q	A	I	E	K	G	I	A	R	N	G	I	D	F	L	I	L	T	R	L	I	P	L	F	P	Y	N	I	Q	N	Y	A	Y	G	L	T	T	I
Query Conservation
Alig confidence																																										.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		A	V	V	V	G	S	A	I	G	L	Y	Y	Y	L	R	V	A	V	S	L	Y	L	H	A	P	E	Q	P	S	N	W	Q	Y	S	A	G	G	I	V	V	.	.	.	.	.	.	L	I	S	A	L	L	V	L	V	L	G	V	W	P	Q	P	L	I	S	I	V	R	L	A	M	P	L
Template Known Secondary structure																							S								S	T	T									.	.	.	.	.	.																							T
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.							.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions