Job Description P76219 Confidence 1.42% Date Thu Jan 5 12:20:43 GMT 2012 Rank 83 Aligned Residues 145 % Identity 16% Template c2onkC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda Resolution 3.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	F	A	C	L	I	F	A	L	V	I	Y	A	I	H	A	F	G	L	F	D	L	L	T	D	L	P	H	L	Q	T	L	I	R	Q	S	G	F	F	G	Y	S	L	Y	I	L	L	F	I	I	A	T	L	L	L	L	P	G	S	I	L	V	I	A	G	G	I	V	F	G	P	L	L	G	T	L	L	S	L
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	L	L	S	S	I	I	L	L	F	V	L	L	P	V	A	A	T	V	T	L	Q	L	F	N	F	D	E	F	L	K	A	A	S	D	P	A	V	W	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	T	T	Y	Y	A	A	L	I	S	T	L
Template Known Secondary structure																							T	T	T	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																										.	.	.	.	.	.	.	.	.	60	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	A	T	L	A	S	S	C	S	F	L	L	A	R	W	.	.	L	G	R	D	L	L	L	K	Y	V	G	H	S	N	T	F	Q	A	I	E	K	G	I	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	I	D	F	L	I	L	T	R	L	I	P	L	F	P	Y	N
Query Conservation																		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	V	I	F	G	T	P	L	A	Y	I	L	A	R	K	S	F	P	G	K	S	V	V	E	G	I	V	D	L	P	V	V	I	P	H	T	V	A	G	I	A	L	L	V	V	F	G	S	S	G	L	I	G	S	F	S	P	L	K	F	V	D	A	L	P	G	I	V	V	A	M	L	F	V	S	V	P	I	Y
Template Known Secondary structure																S				S	S														S														S	T	T	S	T	T	T	T	T		S	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	N	Y	A	Y	G	L	T	T	I	A	F	W	P	Y	T	L	I	S	A	L	T	T	L	P	G	I	V	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	Q	A	K	E	G	F	A	S	V	D	V	R	L	E	H	V	A	R	T	L	G	S	S	P	L	R	V	F	F
Template Known Secondary structure												S											T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions