Job Description P76219 Confidence 6.41% Date Thu Jan 5 12:20:43 GMT 2012 Rank 9 Aligned Residues 193 % Identity 17% Template c2jlnA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter Resolution 2.85 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		T	D	L	P	H	L	Q	T	L	I	R	Q	S	G	F	F	G	Y	S	L	Y	I	L	L	F	I	I	A	T	L	L	L	L	P	G	S	I	L	V	I	A	G	G	I	V	.	.	F	G	P	L	L	G	T	L	L	S	L	I	A	A	T	L	A	S	S	C	S	F	L	L	A	R	W	L	G	R	D	L	L
Query Conservation																																															.	.
Alig confidence																			.	.	.	.	.	.																							.	.																																	.
Template Conservation																			.	.	.	.	.	.																																																									.
Template Sequence		P	S	N	A	P	T	R	Y	A	E	R	S	V	G	P	F	S	.	.	.	.	.	.	L	A	A	I	W	F	A	M	A	I	Q	V	A	I	F	I	A	A	G	Q	M	T	S	S	F	Q	V	W	Q	V	I	V	A	I	A	A	G	C	T	I	A	V	I	L	L	F	F	T	Q	S	A	A	I	R	W	G	.
Template Known Secondary structure		S	T	T	S				G	G	G			B					.	.	.	.	.	.											S	T										T	T	T	S																								T								.
Template Predicted Secondary structure																			.	.	.	.	.	.																																																									.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	Y	V	G	H	S	N	T	F	Q	A	I	E	K	G	I	A	R	N	G	I	D	F	L	I	L	T	R	L	I	P	L	F	P	Y	N	I	Q	N	Y	A	Y	G	L	T	T	I	A	F	W	P	Y	T	L	I	S	A	L	T	T	L	P	G	I	V	I	Y	T	V	M	A	S	D	L	A	N	E	G	I
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	I	N	F	T	V	A	A	R	M	P	F	G	I	R	G	S	L	I	P	I	T	L	K	A	L	L	S	L	F	W	F	G	F	Q	T	W	L	G	A	L	A	L	D	E	I	T	R	L	L	T	G	F	T	N	L	P	L	W	I	V	I	F	G	A	I	Q	V	V	T	T	F	Y	G	I
Template Known Secondary structure		.	.	.	.	.	.							T	T	T	T	S		T	T	T	T																																																							T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	F	I	L	Q	L	C	L	A	G	L	A	L	F	I	L	V	Q	L	A	K	L	Y	A	R	H	K	H	V	D	L	S	A	S	R	R	S	P	L	T	H	P	K	N	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	I	R	W	M	N	V	F	A	S	P	V	L	L	A	M	G	V	Y	M	V	Y	L	M	L	D	G	A	D	V	S	L	G	E	V	M	S	M	G	G	E	N	P	G	M	P	F
Template Known Secondary structure																															T							T	T				S	S			S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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