Job Description P77286 Confidence 98.40% Date Thu Jan 5 12:27:14 GMT 2012 Rank 12 Aligned Residues 148 % Identity 18% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	G	A	Y	V	D	S	W	A	L	Y	N	W	F	D	N	S	V	S	S	D	N	R	S	A	D	D	Y	D	S	R	G	V	T	A	S	V	E	G	G	Y	T	F	E	A	G	T	F	S	G	S	E	G	T	L	N	T	W	Y	V	Q	P	Q	A	Q	I	T	W	M	G	V	K	D	S	D	H	T	R	K
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.														.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.														.	.	.	.
Template Sequence		A	S	G	F	Y	V	Q	A	D	A	A	H	A	K	A	S	S	S	L	G	.	.	.	.	.	.	.	.	.	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	.	.	.	.	.	.	.	.	.	.	.	.	N	D	L	.	.	.	.	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	.	.	.	.
Template Known Secondary structure																			S	S		.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	T	T		.	.	.	.												S	S	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.														.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.										.	.	.	.	.	.	.	30	.	.	.	.	.	.	.													.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	T	R	I	E	T	E	G	D	G	N	V	Q	T	R	L	G	V	K	T	Y	L	N	S	H	H	Q	R	D	D	G	K	Q	R	E	F	Q	P	Y	I	E	A	N	W	I	N	N	S	K	V	Y	A	V	K	M	N	G	Q	T	V	G	R	E	G	A	R	N	L	G	E	V	R	T	G	V	E	A	K	V
Query Conservation
Alig confidence		.	.	.	.	.	.																									.	.	.	.	.	.																							.	.	.
Template Conservation		.	.	.	.	.	.																									.	.	.	.	.	.																							.	.	.
Template Sequence		.	.	.	.	.	.	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	.	.	.	.	.	.	V	K	P	Y	L	G	A	R	L	S	L	N	R	A	S	V	D	L	G	G	S	D	.	.	.	S	F	S	Q	T	S	I	G	L	G	V	L	T	G	V	S	Y	A	V
Template Known Secondary structure		.	.	.	.	.	.			S	S																		S	S	S	.	.	.	.	.	.																			T	T			.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																									.	.	.	.	.	.																							.	.	.
Template SS confidence
								54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.						.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		N	N	N	L	S	L	W	G	N	V	G	V	Q	L	.	.	.	.	.	G	D	K	G	Y	S	D	T	Q	G	M	L	G	V	K	Y	S	W
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		T	P	N	V	D	L	D	A	G	Y	R	Y	N	Y	I	G	K	V	N	T	V	K	N	V	R	S	G	E	L	S	A	G	V	R	V	K	F
Template Known Secondary structure			T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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