Job Description P77286 Confidence 98.41% Date Thu Jan 5 12:27:14 GMT 2012 Rank 11 Aligned Residues 159 % Identity 12% Template d1g90a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution UNK

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	A	Y	V	D	S	W	A	L	Y	N	W	F	D	N	S	V	S	S	D	N	R	S	A	D	D	Y	D	S	R	G	V	T	A	S	V	E	G	G	Y	T	F	E	A	G	T	F	S	G	S	E	G	T	L	N	T	W	Y	V	Q	P	Q	A	Q	I	T	W	M	G	V	K	D	S	D	H	T	R	K	D
Query Conservation
Alig confidence																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	W	Y	T	G	A	K	L	G	F	S	Q	Y	H	D	.	.	T	G	F	I	N	N	N	G	P	T	H	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	F	E	M	G	Y	D	F	.	.	.	.	.	.	.	.	.	.	L	G
Template Known Secondary structure																	S	.	.	S	S			B	S	S					S	S													T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.														.	50	.	.	.	.	.	.	.											.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	R	I	E	T	E	G	D	G	N	V	Q	T	R	L	G	V	K	T	Y	L	N	S	H	H	Q	R	D	D	G	K	Q	R	E	F	Q	P	Y	I	E	A	N	W	I	N	N	S	K	V	Y	A	V	K	M	N	G	Q	T	V	G	R	E	G	A	R	N	L	G	E	V	R	T	G	V	E	A	K	V	N
Query Conservation
Alig confidence																																	.	.	.	.																							.	.	.
Template Conservation																																	.	.	.	.																							.	.	.
Template Sequence		R	M	P	Y	K	G	S	V	E	N	G	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	.	.	.	.	L	D	I	Y	T	R	L	G	G	M	V	F	R	A	D	T	K	S	N	V	Y	G	.	.	.	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T
Template Known Secondary structure		S		T	T		S	S				S																	S	S	S	S	.	.	.	.																		S	B	T	T	B	.	.	.
Template Predicted Secondary structure																																	.	.	.	.																							.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.								.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		N	N	L	S	L	W	G	N	V	G	V	Q	L	G	D	K	G	Y	.	.	.	.	.	.	.	S	D	T	Q	G	M	L	G	V	K	Y	S	W
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	I	A	T	R	L	E	Y	Q	F	T	N	N	I	G	D	A	H	T	I	G	T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure		T	T																B	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions