Job Description P77286 Confidence 97.63% Date Thu Jan 5 12:27:14 GMT 2012 Rank 21 Aligned Residues 148 % Identity 11% Template c3qraA_ PDB info PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	A	L	Y	N	W	F	D	N	S	V	S	S	D	N	R	S	A	D	D	Y	D	S	R	G	V	T	A	S	V	E	G	G	Y	T	F	E	A	G	T	F	S	G	S	E	G	T	L	N	T	W	Y	V	Q	P	Q	A	Q	I	T	W	M	G	V	K	D	S	D	H	T	R	K	D	G	T	R	I	E	T
Query Conservation
Alig confidence																					.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	I	S	I	G	Y	A	Q	S	R	V	K	E	D	G	Y	K	L	.	.	.	D	K	N	P	R	G	F	N	L	K	Y	R	Y	E	F	N	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	V	I	G	S	F	A	Q	T	R	R	G	F	E	E	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T	S			.	.	.	B														S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.														.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	D	G	N	V	Q	T	R	L	G	V	K	T	Y	L	N	S	H	H	Q	R	D	D	G	K	Q	R	E	F	Q	P	Y	I	E	A	N	W	I	N	N	S	K	V	Y	A	V	K	M	N	G	Q	T	V	G	R	E	G	A	R	N	L	G	E	V	R	T	G	V	E	A	K	V	N	N	N	L	S	L	W
Query Conservation
Alig confidence		.																									.	.	.	.												.	.	.	.
Template Conservation		.																									.	.	.	.												.	.	.	.
Template Sequence		.	S	V	L	I	D	G	D	F	K	Y	Y	S	V	T	A	G	P	V	F	R	I	N	E	Y	.	.	.	.	V	S	L	Y	G	L	L	G	A	G	H	.	.	.	.	G	K	A	K	F	S	S	F	G	Q	S	E	S	R	S	K	T	S	L	A	Y	G	A	G	L	Q	F	N	P	H	P	N	F	V	I	D
Template Known Secondary structure		.																						S	S	S	.	.	.	.												.	.	.	.																													S	S	T	T
Template Predicted Secondary structure		.																									.	.	.	.												.	.	.	.
Template SS confidence
			83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	G	V	Q	L	G	D	K	G	Y	S	D	T	Q	G	M	L	G	V	K	Y	S	W
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		A	S	Y	E	Y	S	K	L	D	D	.	V	K	V	G	T	W	M	L	G	A	G	Y	R	F
Template Known Secondary structure										T	T	.
Template Predicted Secondary structure												.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions