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Job DescriptionP77286
Confidence4.71%DateThu Jan 5 12:27:14 GMT 2012
Rank88Aligned Residues216
% Identity12%Templatec3qlbA_
PDB info PDB header:metal transportChain: A: PDB Molecule:enantio-pyochelin receptor; PDBTitle: enantiopyochelin outer membrane tonb-dependent transporter from2 pseudomonas fluorescens bound to the ferri-enantiopyochelin
Resolution3.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230.........240.........250.........260.........270.........280.........290.........300...
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Query Sequence  NAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDY
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Template Sequence  LADNGLAPYISYSTSFDPVLGTNFYGTPYKPTSAKQSEVGVKYQPPGIDSYITLSLFDLTQEN. VLTTDPAQRLNKIQTG
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   466...470.........480.........490.........500.........510.........520........ .530.........540....
 
   304.....310.........320.........330.........340.........350.........360.........370.........380...
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Query Sequence  DSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQR
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Template Sequence  EINVRGIELEGKASLARG. . . . . . . . . . . . . LDLLAALTYNDAEVSKSNNPLEKGKRPTDTPE. . . . . . KMASLWADYTL
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   545....550.........560.. .......570.........580.........590.... .....600.....
 
   384.....390.........400.........410.........420.........430.... .....440.........450.......
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Query Sequence  DDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKV. . . . . . NNNLSLWGNVGVQLGDKGYSDTQ
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Template Sequence  PEGPLSGLGFGAGVRYIGSTEADAANTQRV. . . . . . . PSYTLLDAAVHYDFDKLIPAAKGLRLAVNATNLTDKHYYEGCS
Template Known Secondary structure 
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GGGSSGGGTTSTT




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   606...610.........620.........630..... ....640.........650.........660.........670........
 
   458.460......
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Query Sequence  . . . . . . . . . . . GMLGVKYSW
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Template Sequence  LTNCSAGYDRSVIASLRYRW
Template Known Secondary structure  SSB




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   679680.........690........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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