Return to main results Retrieve Phyre Job Id

Job DescriptionP77286
Confidence99.78%DateThu Jan 5 12:27:14 GMT 2012
Rank7Aligned Residues115
% Identity34%Templatec3ml3A_
PDB info PDB header:protein transportChain: A: PDB Molecule:outer membrane protein icsa autotransporter; PDBTitle: crystal structure of the icsa autochaperone region
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  MNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAG
Query Conservation    
   
 





 



   
              

 
 
 
 
       
               

 
     
Alig confidence 















































































Template Conservation            



 


 
  
 
 


 
  
 
 

 


 
 


 
 
 
 
 

 

 
  

 

   
    
Template Sequence  LNNSSSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEIAGHASGITYVAVTNEGGSGDKTLEGVQIISTDSSDKN
Template Known Secondary structure 

S
GGG


S


SSTT

B
SSSS





SS

S
TT
Template Predicted Secondary structure 









































Template SS confidence 















































































   624.....630.........640.........650.........660.........670.........680.........690.........700...
 
   81........90.........100..... ....110......
Predicted Secondary structure 







..



Query SS confidence 
























. .










Query Sequence  NFALTTGTVEAGAYVYTLAKGKGND. . EKNWYLTSKWD
Query Conservation   
         
     
       ..     
     
Alig confidence 






.
















..










Template Conservation   
 
   .
 



 
 
            


 
 

Template Sequence  AFIQKGR. IVAGSYDYRLKQGTASGLNTNKWYLTSQMD
Template Known Secondary structure  S
S
.TTS
TTS

TT
Template Predicted Secondary structure 


.











Template SS confidence 





































   704.....710 .........720.........730.........740
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions