Job Description P77286 Confidence 100.00% Date Thu Jan 5 12:27:14 GMT 2012 Rank 3 Aligned Residues 273 % Identity 20% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	Y	R	P	E	A	G	S	Y	I	S	N	I	A	A	A	N	S	L	F	S	H	R	L	H	D	R	L	G	E	P	Q	Y	T	D	S	L	H	S	Q	G	S	A	S	S	M	W	M	R	H	V	G	G	H	E	R	S	R	A	G	D	G	Q	L	N	T	Q	A	N	R	Y	V	L	Q	L	G	G	D	L
Query Conservation
Alig confidence																																																														.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		G	T	M	A	R	N	D	G	Q	G	K	A	A	A	T	F	M	H	I	S	Y	N	N	F	I	T	E	V	D	N	L	N	K	R	M	G	D	L	R	D	I	N	G	E	A	G	T	W	V	R	L	L	N	G	S	G	S	A	D	G	.	.	.	.	.	G	F	T	D	H	Y	T	L	L	Q	M	G	A	D	R
Template Known Secondary structure																												T												T	T				S															S	T	.	.	.	.	.	T
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		1072	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.						.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		A	Q	W	S	S	N	A	Q	D	R	W	H	L	G	V	M	A	G	Y	A	N	Q	H	S	N	T	Q	S	N	R	V	G	Y	K	S	D	G	R	I	S	G	Y	S	A	G	L	Y	A	T	W	Y	Q	N	D	A	N	K	T	G	A	Y	V	D	S	W	A	L	Y	N	W	F	D	N	S	.	.	V	S	S	D
Query Conservation																																																																												.	.
Alig confidence							.	.																			.	.	.	.	.	.																								.	.	.	.																	.	.
Template Conservation							.	.																			.	.	.	.	.	.																								.	.	.	.
Template Sequence		K	H	E	L	G	.	.	S	M	D	L	F	T	G	V	M	A	T	Y	T	D	T	D	A	S	.	.	.	.	.	.	A	D	L	Y	S	G	K	T	K	S	W	G	G	G	F	Y	A	S	G	L	F	R	S	.	.	.	.	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N	F	A
Template Known Secondary structure						T	.	.	T																		.	.	.	.	.	.		T	T																			T	T	.	.	.	.	S																			S	S	T
Template Predicted Secondary structure							.	.																			.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		1147	.	.	1150	.			.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.							1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.					.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	S	A	D	D	Y	D	S	R	G	V	T	A	S	V	E	G	G	Y	T	F	E	A	G	T	F	S	G	S	E	G	T	L	N	T	W	Y	V	Q	P	Q	A	Q	I	T	W	M	G	V	K	D	S	D	H	T	R	K	D	G	T	R	I	E	T	E	G	D	G	N	V	Q	T	R	L	G	V	K	T	Y
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	G	K	Q	N	F	R	S	H	S	L	Y	A	G	A	E	V	G	Y	R	Y	H	L	T	.	.	.	.	.	.	.	.	.	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G	Q	N	S	V	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	G	R	T	G
Template Known Secondary structure		T																									.	.	.	.	.	.	.	.	.	T	T																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1215	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.										1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.																	.	.	.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	S	H	H	Q	R	D	D	G	K	Q	R	E	F	Q	P	Y	I	E	A	N	W	I	N	N	S	K	V	Y	A	V	K	M	N	G	Q	T	V	G	R	E	G	A	R	N	L	G	E	V	R	T	G	V	E	A	K	V	N	N	N	L	S	L	W	G	N	V	G	V	Q	L	G	D	K	G	Y	S	D	T
Query Conservation
Alig confidence													.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	S	G	K	T	F	S	G	K	D	.	.	.	W	S	L	T	A	R	A	G	L	H	Y	E	F	D	L	T	D	.	.	.	.	.	.	.	.	.	.	S	R	K	D	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G	K	Y	N	T	D	D
Template Known Secondary structure											S	S	.	.	.																S		.	.	.	.	.	.	.	.	.	.																		T	T	T												S		S	S
Template Predicted Secondary structure													.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1285	.	.	.	.	1290	.	.	.	.	.				.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.											.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.
		457	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	M	L	G	V	K	Y	S	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	N	A	N	I	R	Y	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1368	.	1370	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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