Job Description P77286 Confidence 100.00% Date Thu Jan 5 12:27:14 GMT 2012 Rank 5 Aligned Residues 263 % Identity 21% Template c2qomB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. Resolution 2.66 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	D	R	L	G	E	P	Q	Y	T	D	S	L	H	S	Q	G	S	A	S	S	M	W	M	R	H	V	G	G	H	E	R	S	R	A	G	D	G	Q	L	N	T	Q	A	N	R	Y	V	L	Q	L	G	G	D	L	A	Q	W	S	S	N	A	Q	D	R	W	H	L	G	V	M	A	G	Y	A	N	Q	H	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.																				.	.	.	.	.																		.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																				.	.	.	.	.																		.	.	.	.	.
Template Sequence		L	N	K	R	M	G	D	L	.	.	.	.	.	.	.	.	.	R	D	E	A	G	A	W	A	R	I	M	S	G	T	G	S	A	S	G	.	.	.	.	.	G	F	S	D	N	Y	T	H	V	Q	V	G	V	D	K	K	H	.	.	.	.	.	E	L	G	L	D	L	F	T	G	F	T	V	T	H	T	D	S
Template Known Secondary structure						T				.	.	.	.	.	.	.	.	.																		S	T	.	.	.	.	.	T																	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																				.	.	.	.	.																		.	.	.	.	.
Template SS confidence
		1025	.	.	.	.	1030	.	.										.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.						.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.						.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	Q	S	N	R	V	G	Y	K	S	D	G	R	I	S	G	Y	S	A	G	L	Y	A	T	W	Y	Q	N	D	A	N	K	T	G	A	Y	V	D	S	W	A	L	Y	N	W	F	D	N	S	V	S	S	D	N	R	S	A	D	D	Y	D	S	R	G	V	T	A	S	V	E	G	G	Y	T	F	E	A	G	T
Query Conservation
Alig confidence					.	.	.	.																								.	.	.	.																						.																								.
Template Conservation					.	.	.	.																								.	.	.	.																						.																								.
Template Sequence		S	A	S	.	.	.	.	A	D	V	F	S	G	K	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	S	.	.	.	.	G	A	Y	I	D	L	I	G	K	Y	V	H	H	D	N	E	Y	T	A	T	F	.	A	T	R	D	Y	S	T	H	S	W	Y	A	G	A	E	A	G	Y	R	Y	H	V	T	.
Template Known Secondary structure					.	.	.	.		S	S																			T	T	.	.	.	.	S																			S		.																								.
Template Predicted Secondary structure					.	.	.	.																								.	.	.	.																						.																								.
Template SS confidence
		1090	.	.					.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.					.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.		.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	G	S	E	G	T	L	N	T	W	Y	V	Q	P	Q	A	Q	I	T	W	M	G	V	K	D	S	D	H	T	R	K	D	G	T	R	I	E	T	E	G	D	G	N	V	Q	T	R	L	G	V	K	T	Y	L	N	S	H	H	Q	R	D	D	G	K	Q	R	E	F	Q	P	Y	I	E	A	N	W	I	N	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																												.	.																										.	.
Template Conservation		.	.	.	.	.	.	.	.																												.	.																										.	.
Template Sequence		.	.	.	.	.	.	.	.	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G	S	V	S	G	K	Q	F	A	W	K	D	G	M	.	.	H	L	S	M	K	D	K	D	Y	N	P	L	I	G	R	T	G	V	D	V	G	K	S	F	S	.	.	G	K	W	K	V	T	A	R	A	G	L	G	Y	Q	F	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T																					B					.	.	S	B																								.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																												.	.																										.	.
Template SS confidence
										1163	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.			1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.			.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230
		403	.	.	.	.	.	.	410					.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		S	K	V	Y	A	V	K	M	.	.	.	.	N	G	Q	T	V	G	R	E	G	A	R	N	L	G	E	V	R	T	G	V	E	A	K	V	N	N	N	L	S	L	W	G	N	V	G	V	Q	L	G	D	K	G	Y	S	D	T	Q	G	M	L	G	V	K	Y	S	W
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		L	L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E	K	D	S	R	M	L	M	S	V	G	L	N	A	E	I	R	D	N	V	R	F	G	L	E	F	E	K	S	A	F	G	K	Y	N	V	D	N	A	V	N	A	N	F	R	Y	S	F
Template Known Secondary structure					T		T	T	B				T	T	S	S			S	S	S	S																T	T	T					.							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1233	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions