Job Description P77286 Confidence 5.30% Date Thu Jan 5 12:27:14 GMT 2012 Rank 78 Aligned Residues 80 % Identity 9% Template c2k4tA_ PDB info PDB header:membrane protein,apoptosis Chain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles Resolution UNK

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		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		V	K	T	Y	L	N	S	H	H	Q	R	D	D	G	K	Q	R	E	F	Q	P	Y	I	E	A	N	W	I	N	N	S	.	K	V	Y	A	V	K	M	N	G	Q	T	V	G	R	E	G	A	R	N	L	G	E	V	R	T	G	V	E	A	K	V	N	N	N	L	S	L	W	G	N	V	G	V	Q	L	G	D	K
Query Conservation																																	.
Alig confidence																	.	.	.	.	.												.											.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		L	E	T	A	V	N	L	A	W	T	A	G	N	S	N	.	.	.	.	.	T	R	F	G	I	A	A	K	Y	Q	I	D	P	D	A	C	F	S	A	K	V	N	.	.	.	.	.	.	.	.	N	S	S	L	I	G	L	G	Y	T	Q	T	L	K	P	G	I	K	L	T	L	S	A	L	L	D	G	K	N	V
Template Known Secondary structure												T	T	S	S		.	.	.	.	.													T	T									.	.	.	.	.	.	.	.	S	S	S											S	S	S										S	T	T		G
Template Predicted Secondary structure																	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.									.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	S	D	T	Q	G	M	L	G	V	K	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	G	G	H	K	L	G	L	G	L	E	F	Q
Template Known Secondary structure		G	G	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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