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Job DescriptionP77286
Confidence98.28%DateThu Jan 5 12:27:14 GMT 2012
Rank13Aligned Residues144
% Identity18%Templatec2jmmA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   276...280.........290.........300.........310.........320.........330.........340.........350.....
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Query Sequence  TGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKD
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Template Sequence  NTWYTGAKLGWSQYS. . . . . . . . . . . . . RENQLGAGAFGGYQV. . . . . . . . . . . . . . . . . NPYVGFEMGYDWLGRMPR. .
Template Known Secondary structure  STT
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SS


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   5....10......... 20.........30.... .....40.........50..
 
   356...360.........370.........380.........390.........400.........410.........420.........430.....
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Query Sequence  GTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVN
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Template Sequence  . . . . . . . . . . . KAQGVQLTAKLGYPKLGTDD. . . . LDIYTRLGGMVWRADTSDKDGNGYISAAEASVSPVFAGGVEYVIR
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TT
TTT....
SSB




SSS




B




S
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   53......60.........70.. .......80.........90.........100.........110.......
 
   436... 440.........450.........460......
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Query Sequence  NNLS. . LWGNVGVQLGDKGYSDTQGMLGVKYSW
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Template Sequence  RRITPEIATRLEYQWTNNASDNGMLSLGVSYRF
Template Known Secondary structure  SS
SSSSSSS
S
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   118.120.........130.........140.........150
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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