Job Description P77286 Confidence 45.13% Date Thu Jan 5 12:27:14 GMT 2012 Rank 41 Aligned Residues 121 % Identity 16% Template c2hdiA_ PDB info PDB header:protein transport,antimicrobial protein Chain: A: PDB Molecule:colicin i receptor; PDBTitle: crystal structure of the colicin i receptor cir from e.coli in complex2 with receptor binding domain of colicin ia. Resolution 2.50 Å

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		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	R	G	V	T	A	S	V	E	G	G	Y	T	F	E	A	G	T	F	S	G	S	E	G	T	L	N	T	W	Y	V	Q	P	Q	A	Q	I	T	W	M	G	V	K	D	S	D	H	T	R	K	D	G	T	R	I	E	T	E	G	D	G	N	V	Q	T	R	L	G	V	K	T	Y	L	N	S	H	H	Q	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	R	I	Q	G	V	E	T	E	L	K	I	P	F	N	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	L	S	I	N	Y	T	Y	N	D	G	R	D	V	S	N	G	E	.	.	.	.	.	.	.	.	.	.	N	K	P	L	S	D	L	P	F	H	T	A	N	G	T	L	D	W	K	P
Template Known Secondary structure																	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.														.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.											.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		D	D	G	K	Q	R	E	F	Q	P	Y	I	E	A	N	W	I	N	N	S	K	V	Y	A	V	K	M	N	G	Q	T	V	G	R	E	G	A	R	N	L	G	E	V	R	T	G	V	E	A	K	V	N	N	N	L	S	L	W	G	N	V	G	V	Q	L	G	D	K	G	Y	S	D	.	.	.	T	Q	G	M	L
Query Conservation																																																																										.	.	.
Alig confidence							.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation							.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	L	E	D	.	.	W	S	M	Y	M	S	G	H	Y	T	G	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Y	T	I	W	N	T	G	A	A	W	Q	V	T	K	D	V	K	L	R	A	G	V	L	N	L	G	D	K	D	L	S	R	N	E	D	G	R	R	Y	F	M
Template Known Secondary structure		S	S		T	T	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T									S	T	T
Template Predicted Secondary structure							.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		582	.	.	.	.			.	.	.	590	.	.	.	.	.	.	.	.	.																		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		461	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	K	Y	S	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	D	Y	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		658	.	660	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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