 |
Job Description | P0AGG4 | Confidence | 96.15% | Date | Thu Jan 5 11:29:03 GMT 2012 |
Rank | 276 | Aligned Residues | 81 |
% Identity | 15% | Template | d1tp9a1 |
SCOP info | Thioredoxin fold
| Thioredoxin-like
| Glutathione peroxidase-like
|
Resolution | 1.62 |
|
 |
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | K | L | L | K | D | D | L | P | V | V | I | D | F | W | A | P | W | C | G | P | C | . |
R | N | F | A | P | I | F | E | D | V | A | Q | E | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | G | K | V | R | F | V | K | V | N | T | E | A | E | R | E | L |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
| . |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |
Template Sequence |   |
V | H | S | L | V | A | G | K | K | V | I | L | F | G | V | P | G | A | F | T | P | T | C | S | L | K | H | V | P | G | F | I | E | K | A | G | E | L | K | S | K | G | V | T | E | I | L | C | I | S | V | N | D | P | F | V | M | K | A | W | A | K | S | Y | P | E | N | K | H | V | K | F | L | A | D | G | S | A | T | Y |
Template Known Secondary structure |   |
S |  |  |  |  | T | T | S |  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  | T |
| T | T |
| S | S |  |  |  |  |  |
| T | T | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
  |   |
99 | 100 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | S | R | F | G | I | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | I | P | T | I | M | I | F | K | N | G | Q | V | V | D | M | L | N | G | A |
Query Conservation |   |
  |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|   |   |
Template Sequence |   |
T | H | A | L | G | L | E | L | D | L | Q | E | K | G | L | G | T | R | S | R | R | F | A | L | L | V | D | D | L | K | V | K | A | A | N | I | E | G |
Template Known Secondary structure |   |
 |  |  | T | T |
|  |  |  |  | T | T | T | T | S |  |  |  |  |
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|