Job Description P0AGG4 Confidence 99.41% Date Thu Jan 5 11:29:03 GMT 2012 Rank 129 Aligned Residues 98 % Identity 20% Template c3iraA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: the crystal structure of one domain of the conserved protein from2 methanosarcina mazei go1 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		T	G	E	T	L	D	K	L	L	K	D	D	L	P	V	V	I	D	F	W	A	P	W	C	G	P	C	R	N	F	A	P	I	F	.	.	.	E	D	V	A	Q	E	R	S	G	K	V	R	F	V	K	V	N	T	E	A	E	R	E	L	S	S	R	F	.	.	.	.	.	.	.	.	G	I	R	S	I	P	T
Query Conservation																																				.	.	.																													.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	E	A	F	E	K	A	R	K	E	N	K	P	V	F	L	S	I	G	Y	S	T	C	H	W	C	H	M	M	A	H	E	S	F	E	D	E	E	V	A	G	L	M	N	E	A	F	V	S	I	K	V	D	R	E	E	R	P	D	I	D	N	I	Y	M	T	V	C	Q	I	I	L	G	R	G	G	W	P	L
Template Known Secondary structure		S											T										T	T											T	T	T																			T	T	T																	S				S	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		110	.	.	.		.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure						.											.	.	.	.	.	.	.	.
Query SS confidence						.											.	.	.	.	.	.	.	.
Query Sequence		I	M	I	F	.	K	N	G	Q	V	V	D	M	L	N	.	.	.	.	.	.	.	.	G	A	V	P	K	A	P	F	D	S	W	L	N	E	S
Query Conservation						.											.	.	.	.	.	.	.	.
Alig confidence						.											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	I	M	T	P	G	K	K	P	F	F	A	G	T	Y	I	P	K	N	T	R	F	N	Q	I	G	M	L	E	L	V	P	R	I	K	E	I
Template Known Secondary structure							T	T	S							S	S			S	S		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions