Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGG4
Confidence99.91%DateThu Jan 5 11:29:03 GMT 2012
Rank18Aligned Residues106
% Identity20%Templatec3gnjD_
PDB info PDB header:structural genomics, unknown functionChain: D: PDB Molecule:thioredoxin domain protein; PDBTitle: the crystal structure of a thioredoxin-related protein from2 desulfitobacterium hafniense dcb
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40....... ..50.........60.........70.........80.........90.........100.........110..
Predicted Secondary structure 




.

























Query SS confidence 













.
































































Query Sequence  DGEVINATGETLDK. LLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMI
Query Conservation     
  
    
  . 
     


 
 
 

  
    
                               
   

 
 
Alig confidence 













.
































































Template Conservation     
  
    
   
      


 
 
  
  
                      
       
     
   

 
 
Template Sequence  AXSLEKLDTNTFEQLIYDEGKACLVXFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILY
Template Known Secondary structure 
SS


TS



SS
TTS
TTSTTTSTT

SS
Template Predicted Secondary structure 

























Template SS confidence 















































































   0.........10.........20.........30.........40.........50.........60.........70.........
 
   113......120.........130.........
Predicted Secondary structure 






Query SS confidence 


























Query Sequence  FKNGQVVDMLNGAVPKAPFDSWLNESL
Query Conservation    

  
 
  
      
   
   
Alig confidence 


























Template Conservation     
       
      
   
   
Template Sequence  FKDGEYKGKXAGDVEDDEVEQXIADVL
Template Known Secondary structure  TTSS

Template Predicted Secondary structure 






Template SS confidence 


























   80.........90.........100......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions