Job Description P0AGG4 Confidence 98.32% Date Thu Jan 5 11:29:03 GMT 2012 Rank 186 Aligned Residues 87 % Identity 31% Template c3feuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative lipoprotein; PDBTitle: crystal structure of dsba-like thioredoxin domain vf_a0457 from vibrio2 fischeri Resolution 1.76 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	L	P	V	V	I	D	F	W	A	P	W	C	G	P	C	R	N	F	A	P	I	F	E	D	V	A	Q	E	R	S	G	K	V	R	F	V	K	V	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	X	A	P	V	T	E	V	F	A	L	S	C	G	H	C	R	N	X	E	N	F	L	P	V	I	S	Q	E	A	G	T	D	I	G	K	X	H	I	T	F	N	Q	S	A	H	I	A	S	X	F	Y	Y	A	A	E	X	Q	V	D	G	A	P	D	H	A	F	X	E	D	L	F	A	A	T	Q	X	G	E
Template Known Secondary structure		S				S							T	T								G	G	G									T	S									S	S	S														T	T	S	S	S	S														T			T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
																																								93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	R	E	L	S	S	R	F	G	I	R	S	I	P	T	I	M	I	F	K	N	G	Q	V	V	D	M	L	N	G	A	V	P	K	A	P	F	D	S	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																																												.	.
Template Sequence		G	T	T	L	T	E	Q	Q	E	A	Y	S	K	A	F	T	S	R	G	L	V	S	P	Y	D	F	N	E	E	Q	R	D	T	L	I	K	K	V	D	N	A	K	X	L	S	E	K	S	G	I	S	S	V	P	T	F	V	V	.	.	N	G	K	Y	N	V	L	I	G	G	H	D	D	P	K	Q	I	A	D	T
Template Known Secondary structure		T	S															T	T	T				G	G	G																								T			S	S	S					.	.	T	T	T					G	G	G		S	S
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		135	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	Y	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions