Job Description P0AGG4 Confidence 98.92% Date Thu Jan 5 11:29:03 GMT 2012 Rank 166 Aligned Residues 108 % Identity 17% Template c3eurA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the c-terminal domain of uncharacterized protein2 from bacteroides fragilis nctc 9343 Resolution 1.30 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	C	G	H	D	L	F	D	G	E	V	I	N	A	T	G	E	T	L	D	K	L	L	K	D	D	L	P	V	V	I	D	F	W	A	P	W	C	G	P	C	R	N	F	A	P	I	F	E	D	V	A	Q	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	G	T	K	A	L	N	F	T	Y	T	L	D	S	G	V	K	G	T	L	Y	Q	F	P	A	E	Y	T	L	L	F	I	N	N	P	G	C	H	A	C	A	E	X	I	E	G	L	K	A	S	P	V	I	N	G	F	T	A	A	K	K	L	K	V	L	S	I	Y	P	D	E	E	L	D	E	W	K	K	H
Template Known Secondary structure			T	T	S	B									T	T	S					T	T	T				S									S	S	S																						T	T	S									S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
					82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																	.
Query SS confidence		.	.	.																																	.
Query Sequence		.	.	.	S	G	K	V	R	F	V	K	V	N	T	E	A	E	R	E	L	S	S	R	F	G	I	R	S	I	P	T	I	M	I	F	.	K	N	G	Q	V	V	D	M	L	N	G	A	V	P	K	A	P	F	D	S	W	L	N	E
Query Conservation		.	.	.																																	.
Alig confidence		.	.	.																																	.													.	.	.
Template Conservation																																																		.	.	.
Template Sequence		R	N	D	F	A	K	E	W	T	N	G	Y	D	K	E	L	V	I	K	N	K	N	L	Y	D	L	R	A	I	P	T	L	Y	L	L	D	K	N	K	T	V	L	L	K	D	A	T	L	.	.	.	Q	K	V	E	Q	Y	L	A	E
Template Known Secondary structure		G	G	G	S		T	T	S						T	T						T	T		S			T	T		S							T	T		B									.	.	.
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions