 |
Job Description | P0AGG4 | Confidence | 99.78% | Date | Thu Jan 5 11:29:03 GMT 2012 |
Rank | 94 | Aligned Residues | 97 |
% Identity | 27% | Template | c3d6iB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:monothiol glutaredoxin-3; |
PDBTitle: structure of the thioredoxin-like domain of yeast2 glutaredoxin 3
|
Resolution | 1.50 Å |
|
 |
  |   |
36 | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | |
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
|
|  |  |  | . |
|  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | I | N | A | . |
T | G | E | T | L | D | K | L | L | K | D | . |
. |
. |
D | L | P | V | V | I | D | F | W | A | P | W | C | G | P | C | R | N | F | A | P | I | F | E | D | V | A | Q | E | R | S | G | K | . |
V | R | F | V | K | V | N | T | E | A | E | R | E | L | S | S | R | F | G | I | R | S | I | P | T | I |
Query Conservation |   |
  |
|   |   |
| . |   |   |   |   |
|   |   |   |
|   |   | . | . | . |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|   |
|   |
|
|   |   |
|   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
Template Sequence |   |
P | V | I | E | I | N | D | Q | E | Q | F | T | Y | L | T | T | T | A | A | G | D | K | L | I | V | L | Y | F | H | T | S | W | A | L | K | Q | V | . |
. |
. |
. |
. |
F | E | A | I | S | N | E | P | S | N | S | N | V | S | F | L | S | I | D | A | D | E | N | S | E | I | S | E | L | F | E | I | S | A | V | P | Y | F |
Template Known Secondary structure |   |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  | T | T | T | T | T | T |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . |  |  |  |  |  | T |
| G | G | G | T | T |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | T | T |
|
| S | S | S |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
  |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | F | K | N | G | Q | V | V | D | M | L | N | G | A | V | P | K | A | P | F | D | S | W | L | N | E | S |
Query Conservation |   |
|   |   |   |
|
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |   |
|   | . |   |   |   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
I | I | I | H | K | G | T | I | L | K | E | L | S | G | A | . |
D | P | K | E | Y | V | S | L | L | E | D | K |
Template Known Secondary structure |   |
 |  |  |  | T | T |  |  |  |  |  |  |
| S |
| . |
|  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . | . | 140 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|