Job Description P0AGG4 Confidence 97.87% Date Thu Jan 5 11:29:03 GMT 2012 Rank 223 Aligned Residues 85 % Identity 15% Template c2znmA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsba; PDBTitle: oxidoreductase nmdsba3 from neisseria meningitidis Resolution 2.30 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	L	P	V	V	I	D	F	W	A	P	W	C	G	P	C	R	N	F	A	P	I	F	E	D	V	A	Q	E	R	S	G	K	V	R	F	V	K	V	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	K	I	E	V	L	E	F	F	G	Y	F	C	V	H	C	H	H	F	D	P	L	L	L	K	L	G	K	A	L	P	S	D	A	Y	L	R	T	E	H	V	V	W	Q	P	E	X	L	G	L	A	R	X	A	A	A	V	N	L	S	G	L	K	Y	Q	A	N	P	A	V	F	K	A	V	Y	E	Q	K	I
Template Known Secondary structure		S	S	S									T	T	S			T	T	S	S											S		T	T											S	G	G	G														T																	S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
																																						93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	R	E	L	S	S	R	F	G	I	R	S	I	P	T	I	M	I	F	K	N	G	Q	V	V	D	M	L	N	G	A	V	P	K	A	P	F	D	S	W	L	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.				.	.
Template Conservation																																																										.	.				.	.
Template Sequence		R	L	E	N	R	S	V	A	G	K	W	A	L	S	Q	K	G	F	D	G	K	K	L	X	R	A	Y	D	S	P	E	A	A	A	A	A	L	K	X	Q	K	L	T	E	Q	Y	R	I	D	S	T	P	T	V	I	V	.	.	G	G	K	.	.	Y	R	V	I	F	N	N	G	F	D	G	G	V	H	T	I	K
Template Known Secondary structure			T	T	S										T		S	S	S										T	S																	T	T			S	S	S					.	.	T	T	T	.	.							S
Template Predicted Secondary structure																																																										.	.				.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		137	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		177	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions