Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGG4
Confidence95.15%DateThu Jan 5 11:29:03 GMT 2012
Rank281Aligned Residues103
% Identity16%Templatec2h8lA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:protein disulfide-isomerase a3; PDBTitle: crystal structure of the bb' fragment of erp57
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60....... ..70.........80. ........90.........100...... .
Predicted Secondary structure 









.....















....
Query SS confidence 






























. .













. . .
























. . . .
Query Sequence  VINATGETLDKLLKDDLPVVIDFWAPWCGPC. . RNFAPIFEDVAQER. . . SGKVRFVKVNTEAERELSSRFGIRS. . . . I
Query Conservation 
  
    
   
     


 
 
 

  
..    
         ...                      
  .... 
Alig confidence 






























..













...
























....
Template Conservation 
 
                                        
           
   
           
        
Template Sequence  CPHXTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVXXVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEI
Template Known Secondary structure  S

TTTSSSS

BTTTBTT


TTTTGGGT



S
SS
Template Predicted Secondary structure 


























Template SS confidence 















































































   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   108.110.........120.. .......130.........
Predicted Secondary structure 



..




Query SS confidence 














. .
















Query Sequence  PTIMIFKNGQVVDML. . NGAVPKAPFDSWLNESL
Query Conservation 

 
   

  
 
 .. 
      
   
   
Alig confidence 














..
















Template Conservation 
   
       
          
 
  
     
Template Sequence  PVVAIRTAKGEKFVXQEEFSRDGKALERFLQDYF
Template Known Secondary structure 

TTS


S


TTS
Template Predicted Secondary structure 













Template SS confidence 

































   324.....330.........340.........350.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions