Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGG4
Confidence20.92%DateThu Jan 5 11:29:03 GMT 2012
Rank354Aligned Residues83
% Identity16%Templatec2axoA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical protein atu2684; PDBTitle: x-ray crystal structure of protein agr_c_4864 from agrobacterium2 tumefaciens. northeast structural genomics consortium target atr35.
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.... .....100.........110......
Predicted Secondary structure 













................











Query SS confidence 









































. . . . . . . . . . . . . . . .





















Query Sequence  LPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEA. . . . . . . . . . . . . . . . ERELSSRFGIRSIPTIMIFKNG
Query Conservation    


 
 
 

  
    
                      ................         
   

 
   

Alig confidence 









































................





















Template Conservation   

















  
  
     

 
  





 


 
 

    
 

  

       




 



Template Sequence  KGVVELFTSQGCASCPPADEALRKXIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYXRALGRNGVYTPQAILNG
Template Known Secondary structure 


TT
TT
TSS
STT
SSSS

TT

TT
S


SSTT
Template Predicted Secondary structure 


































Template SS confidence 















































































   43......50.........60.........70.........80.........90.........100.........110.........120..
 
   117..120.........130........
Predicted Secondary structure 



Query SS confidence 





















Query Sequence  QVVDMLNGAVPKAPFDSWLNES
Query Conservation    
 
  
      
   
   
Alig confidence 
...

















Template Conservation   ...    
     
   
   
Template Sequence  R. . . DHVKGADVRGIYDRLDAF
Template Known Secondary structure  T...TT
Template Predicted Secondary structure  ...





Template SS confidence 





















   123 ......130.........140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions