Job Description P0AGG4 Confidence 97.87% Date Thu Jan 5 11:29:03 GMT 2012 Rank 222 Aligned Residues 95 % Identity 15% Template c1zofB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide-reductase; PDBTitle: crystal structure of alkyl hydroperoxide-reductase (ahpc)2 from helicobacter pylori Resolution 2.95 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																														.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	K	L	L	K	D	D	L	P	V	V	I	D	F	W	A	P	W	C	G	P	C	R	N	F	A	P	I	F	E	D	V	A	Q	E	R	S	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	F	V	K	V	N	T	E	A	E
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	K	N	L	G	K	N	G	V	I	L	F	F	W	P	K	D	F	T	F	V	C	P	T	E	I	I	A	F	D	K	R	V	K	D	F	H	E	K	G	F	N	V	I	G	V	S	I	D	S	E	Q	V	H	F	A	W	K	N	T	P	V	E	K	G	G	I	G	Q	V	S	F	P	M	V	A	D	I	T
Template Known Secondary structure		G	G	G	G			S	S								S		S	S		S	S																		T	T								S	S											S		G	G	G	T						S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.								.															.	.	.	.
Query SS confidence													.	.	.	.	.								.															.	.	.	.
Query Sequence		R	E	L	S	S	R	F	G	I	R	S	.	.	.	.	.	I	P	T	I	M	I	F	.	K	N	G	Q	V	V	D	M	L	N	G	A	V	P	.	.	.	.	K	A	P	F	D	S	W	L	N	E	S	L
Query Conservation													.	.	.	.	.								.															.	.	.	.
Alig confidence													.	.	.	.	.								.															.	.	.	.
Template Conservation
Template Sequence		K	S	I	S	R	D	Y	D	V	L	F	E	E	A	I	A	L	R	G	A	F	L	I	D	K	N	M	K	V	R	H	A	V	I	N	D	L	P	L	G	R	N	A	D	E	M	L	R	M	V	D	A	L	L
Template Known Secondary structure		S						T	T				T	T	T											T	T	S	B									S	S			T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions