Job Description P65290 Confidence 7.41% Date Thu Jan 5 12:10:09 GMT 2012 Rank 89 Aligned Residues 41 % Identity 10% Template c3jxoB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:trka-n domain protein; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	K	T	L	V	E	G	V	S	L	T	Y	K	E	G	T	K	V	Y	T	S	T	Q	V	G	K	E	C	Q	F	T	T	G	L	A	V	V	I	T	T	T	Y
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		K	D	L	P	L	P	R	D	S	I	I	A	A	I	V	R	G	G	V	L	V	V	.	.	P	R	G	D	T	E	I	L	S	G	D	K	L	Y	V	I	V	S	A
Template Known Secondary structure		G	G					T	T									T	T					.	.			T	T		B			T	T									T
Template Predicted Secondary structure																								.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions