Job Description P0ADI7 Confidence 19.49% Date Thu Jan 5 11:21:06 GMT 2012 Rank 91 Aligned Residues 38 % Identity 32% Template c2v1dA_ PDB info PDB header:oxidoreductase/repressor Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: structural basis of lsd1-corest selectivity in histone h32 recognition Resolution 3.10 Å

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		114	.	.	.	.	.	120	.																		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	L	R	R	R	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	I	V	L	C	G	I	S	T	N	I	G	V	E	S	T	A	R	N	A	W	E	L	G	F	N	L	V	I	A	E
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																							.	.
Template Sequence		S	Y	L	E	R	H	G	L	I	N	F	G	I	Y	K	R	I	K	P	L	P	T	K	K	T	G	K	V	I	I	I	G	S	G	V	S	G	.	.	L	A	A	A	R	Q	L	Q	S	F	G	M	D	V	T	L	L	E
Template Known Secondary structure							T	T	S	S	S		S	S		B		S	S				S	S			S								S				.	.										T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions