Return to main results Retrieve Phyre Job Id

Job DescriptionP76536
Confidence2.68%DateThu Jan 5 12:24:05 GMT 2012
Rank85Aligned Residues23
% Identity17%Templatec2x29A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:tumor necrosis factor ligand superfamily member PDBTitle: crystal structure of human4-1bb ligand ectodomain
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230.........240... ......250..
Predicted Secondary structure 










.....
Query SS confidence 













. . . . .








Query Sequence  IVRQSLPYGTASGT. . . . . HGLYFCAYC
Query Conservation 



  


    
..... 

 

   
Alig confidence 













.....








Template Conservation   
  




   


 
   





  
Template Sequence  SLTGGLSYKEDTKELVVAKAGVYYVFFQ
Template Known Secondary structure 

BSS

TT

BS

S
Template Predicted Secondary structure 












Template SS confidence 



























   119120.........130.........140......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions