Job Description P76536 Confidence 100.00% Date Thu Jan 5 12:24:05 GMT 2012 Rank 4 Aligned Residues 278 % Identity 22% Template c2wx6B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:peroxidase ycdb; PDBTitle: x-ray crystallographic structure of e. coli apo-efeb Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																							.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	Q	S	G	I	L	P	E	H	C	R	A	A	I	W	I	E	A	N	V	K	G	.	E	V	D	A	L	R	A	A	S	K	T	F	A	D	K	L	A	T	F	E	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	D	A	H	L	G	A	V	V	A	F
Query Conservation																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	H	Q	A	G	I	L	T	P	Q	Q	A	A	M	M	L	V	A	F	D	V	L	A	S	D	K	A	D	L	E	R	L	F	R	L	L	T	Q	R	F	A	F	L	T	Q	G	G	A	A	P	E	T	P	N	P	R	L	P	P	L	D	S	G	I	L	G	G	Y	I	A	P	D	N	L	T	I	T	L	S	V
Template Known Secondary structure		S	S		S	S	S	S	S				S												S	S																												S		T	T	S			S	S			T	T		S					T	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure												.	.																				.	.
Query SS confidence												.	.																				.	.
Query Sequence		G	N	N	T	W	R	A	L	S	G	.	.	G	V	G	A	E	E	L	K	D	F	P	G	Y	G	K	G	L	A	P	.	.	T	T	Q	F	D	V	L	I	H	I	L	S	L	R	H	D	V	N	F	S	V	A	Q	A	A	M	E	A	F	G	D	C	I	E	V	K	E	E	I	H	G	F	R	W	V	E	E
Query Conservation												.	.																				.	.
Alig confidence												.	.																				.	.
Template Conservation
Template Sequence		G	H	S	L	F	D	E	R	F	G	L	A	P	Q	M	P	K	K	L	Q	K	M	T	R	F	P	N	D	S	L	D	A	A	L	C	H	G	D	V	L	L	Q	I	C	A	N	T	Q	D	T	V	I	H	A	L	R	D	I	I	K	H	T	P	D	L	L	S	V	R	W	K	R	E	G	F	I	S	D	H	A
Template Known Secondary structure			G	G	G	G	S	T	T	T	T		G	G	G	S		T	T								T	T					G	G	G	B			S								S	S														T		T	T	T													S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
											136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	R	D	L	S	G	F	V	D	G	T	E	N	P	A	G	E	E	T	R	R	E	V	A	V	I	.	.	.	.	.	.	.	K	D	G	V	D	A	G	G	S	Y	V	F	V	Q	R	W	E	H	N	L	K	Q	L	N	R	M	S	V	H	D	Q	E	M	V	I	G	R	T	K
Query Conservation		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	S	K	G	K	E	T	P	I	N	L	L	G	F	K	D	G	T	A	N	P	D	S	Q	N	D	K	L	M	Q	K	V	V	W	V	T	A	D	Q	Q	E	P	A	W	T	I	G	G	S	Y	Q	A	V	R	L	I	Q	F	R	V	E	F	W	D	R	T	P	L	K	E	Q	Q	T	I	F	G	R	D	K
Template Known Secondary structure				T	S	S	S	S			B		T	T	S	S	B	S	S	T	T				T	T									T				T	T	S	S			G	G	G	T	T																	T	T	S										T	B		T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		200	.	.	.	.	.																.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Query Sequence		E	A	N	E	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	D	E	R	P	E	T	S	H	L	T	R	V	D	L	K	E	D	G	K	G	L	K	I	V	R	Q	S	L	P	Y	G	T	.	.	.	.	.	A	S	G	T	H	G	L	Y	F	C	A	Y	C	A	R	L	H	N	I	E
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		Q	T	G	A	P	L	G	M	Q	H	E	H	D	V	P	D	Y	A	S	D	P	E	G	K	V	I	A	L	D	S	H	I	R	L	A	N	S	L	.	.	.	.	.	.	.	M	L	R	R	G	Y	S	Y	S	L	G	V	T	N	S	G	Q	L	D	M	G	L	L	F	V	C	Y	Q	H	D	L	E	K	G	F
Template Known Secondary structure		T	T			B	T	T		S	S	T	T					G	G	G		T	T		S	S	S		T	T	S					T				.	.	.	.	.	.	.														T	T	S	S												S		T	T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.								.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	L	S	M	F	G	D	T	D	G	K	R	D	A	M	L	R	F	T	K	P	V	T	G	G	Y	Y	F	A	P	S
Query Conservation
Alig confidence											.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		L	T	V	Q	K	R	L	N	G	.	.	.	.	.	E	A	L	E	E	Y	V	K	P	I	G	G	G	Y	F	F	A	L	P
Template Known Secondary structure								T	T	T	.	.	.	.	.		G	G	G	G	T
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.						.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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