Job Description P76536 Confidence 3.74% Date Thu Jan 5 12:24:05 GMT 2012 Rank 56 Aligned Residues 97 % Identity 15% Template c1vdxA_ PDB info PDB header:ligase Chain: A: PDB Molecule:hypothetical protein ph0099; PDBTitle: crystal structure of a pyrococcus horikoshii protein with2 similarities to 2'5' rna-ligase Resolution 2.40 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.
Predicted Secondary structure																																	.	.	.													.	.	.	.																								.	.	.	.	.
Query SS confidence																																	.	.	.													.	.	.	.																								.	.	.	.	.
Query Sequence		I	W	I	E	A	N	V	K	G	E	V	D	A	L	R	A	A	S	K	T	F	A	D	K	L	A	T	F	E	A	K	.	.	.	F	P	D	A	H	L	G	A	V	V	A	F	.	.	.	.	G	N	N	T	W	R	A	L	S	G	G	V	G	A	E	E	L	K	D	F	P	G	Y	.	.	.	.	.	G	K
Query Conservation																																	.	.	.													.	.	.	.																								.	.	.	.	.
Alig confidence										.	.	.																					.	.	.													.	.	.	.														.										.	.	.	.	.
Template Conservation										.	.	.																																																					.
Template Sequence		A	F	I	A	I	D	V	N	.	.	.	E	S	V	R	D	S	L	V	R	A	Q	D	Y	I	G	S	K	E	A	K	I	K	F	V	E	R	E	N	L	H	I	T	L	K	F	L	G	E	I	T	E	E	Q	A	E	E	I	K	N	I	L	K	.	K	I	A	E	K	Y	K	K	H	E	V	K	V	K	G	I
Template Known Secondary structure										.	.	.																S	S	S								G	G	G																									.				T	T	S	B
Template Predicted Secondary structure										.	.	.																																																					.
Template SS confidence
		3	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	P	T	T	Q	F	D	V	L	I	H	I	L	S	L	R	H	D	V	N	F	S	V	A	Q	A	A	M	E	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	F	P	N	P	N	Y	I	R	V	I	W	A	G	I	E	N	D	E	I	I	R	E	M	A	R	E	I	E	D	E	L
Template Known Secondary structure							S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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