Email l.a.kelley@imperial.ac.uk Description P69913 Date Thu Jan 5 12:12:20 GMT 2012 Unique Job ID bf0e670520be9e49

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1t3oA_ 99.9 41 PDB header:rna binding protein Chain: A: PDB Molecule:carbon storage regulator; PDBTitle: solution structure of csra, a bacterial carbon storage2 regulatory protein 2 c2jppB_ 99.9 75 PDB header:translation/rna Chain: B: PDB Molecule:translational repressor; PDBTitle: structural basis of rsma/csra rna recognition: structure of2 rsme bound to the shine-dalgarno sequence of hcna mrna 3 d1vpza_ 99.9 89 Fold:CsrA-like Superfamily:CsrA-like Family:CsrA-like 4 c1vpzB_ 99.9 89 PDB header:rna binding protein Chain: B: PDB Molecule:carbon storage regulator homolog; PDBTitle: crystal structure of a putative carbon storage regulator protein2 (csra, pa0905) from pseudomonas aeruginosa at 2.05 a resolution 5 d1e0ta1 63.3 31 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 6 d2g50a1 62.7 17 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 7 d1pkma1 60.6 18 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 8 d1liua1 59.6 21 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 9 c1e0tD_ 38.5 32 PDB header:phosphotransferase Chain: D: PDB Molecule:pyruvate kinase; PDBTitle: r292d mutant of e. coli pyruvate kinase 10 d2o3ga1 35.6 17 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 11 c3eoeC_ 34.2 32 PDB header:transferase Chain: C: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pyruvate kinase from toxoplasma gondii, 55.m00007 12 d1vhka1 34.0 19 Fold:PUA domain-like Superfamily:PUA domain-like Family:YggJ N-terminal domain-like 13 c3ilaG_ 31.3 31 PDB header:signaling protein Chain: G: PDB Molecule:ryanodine receptor 1; PDBTitle: crystal structure of rabbit ryanodine receptor 1 n-terminal domain (9-2 205) 14 c1t5aB_ 30.6 16 PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase, m2 isozyme; PDBTitle: human pyruvate kinase m2 15 d2o1ra1 30.3 29 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 16 c1aqfB_ 29.3 16 PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase; PDBTitle: pyruvate kinase from rabbit muscle with mg, k, and l-2 phospholactate 17 d1a3xa1 28.7 23 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 18 c1go3E_ 28.2 24 PDB header:transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: structure of an archeal homolog of the eukaryotic rna2 polymerase ii rpb4/rpb7 complex 19 d1pkla1 27.8 25 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 20 d1pmia_ 27.3 22 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Type I phosphomannose isomerase 21 c2eqsA_ not modelled 26.2 26 PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dhx8; PDBTitle: solution structure of the s1 rna binding domain of human2 atp-dependent rna helicase dhx8 22 c3llbA_ not modelled 22.8 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein pa3983 with unknown2 function from pseudomonas aeruginosa pao1 23 c3ma8A_ not modelled 21.1 24 PDB header:transferase Chain: A: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of cgd1_2040, a pyruvate kinase from cryptosporidium2 parvum 24 d2r2za1 not modelled 20.0 16 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 25 c3ec1A_ not modelled 19.6 24 PDB header:hydrolase, signaling protein Chain: A: PDB Molecule:yqeh gtpase; PDBTitle: structure of yqeh gtpase from geobacillus stearothermophilus2 (an atnos1 / atnoa1 ortholog) 26 c3dedB_ not modelled 19.6 13 PDB header:membrane protein Chain: B: PDB Molecule:probable hemolysin; PDBTitle: c-terminal domain of probable hemolysin from chromobacterium violaceum 27 c3h0gS_ not modelled 18.3 16 PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase ii subunit rpb7; PDBTitle: rna polymerase ii from schizosaccharomyces pombe 28 d2z0sa1 not modelled 18.2 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 29 c2xrhA_ not modelled 16.5 29 PDB header:unknown function Chain: A: PDB Molecule:protein hp0721; PDBTitle: crystal structure of the truncated form of hp0721 30 d3deda1 not modelled 15.7 13 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 31 c2khiA_ not modelled 14.8 24 PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s1; PDBTitle: nmr structure of the domain 4 of the e. coli ribosomal2 protein s1 32 c1pklB_ not modelled 14.6 25 PDB header:transferase Chain: B: PDB Molecule:protein (pyruvate kinase); PDBTitle: the structure of leishmania pyruvate kinase 33 d1y14b1 not modelled 14.4 13 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 34 d2p13a1 not modelled 13.7 17 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 35 d2nqwa1 not modelled 13.2 17 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 36 c2khjA_ not modelled 12.9 32 PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s1; PDBTitle: nmr structure of the domain 6 of the e. coli ribosomal2 protein s1 37 d1go3e1 not modelled 12.7 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 38 d2f23a2 not modelled 12.7 28 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 39 c2b8kG_ not modelled 12.5 13 PDB header:transferase Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kda PDBTitle: 12-subunit rna polymerase ii 40 d2oaia1 not modelled 12.0 17 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 41 d1hh2p1 not modelled 11.9 37 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 42 c3e0vB_ not modelled 11.7 25 PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pyruvate kinase from leishmania mexicana in2 complex with sulphate ions 43 d2plsa1 not modelled 11.6 8 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 44 d1nxza1 not modelled 11.3 19 Fold:PUA domain-like Superfamily:PUA domain-like Family:YggJ N-terminal domain-like 45 d1xnea_ not modelled 10.9 25 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 46 c3h2yA_ not modelled 10.3 15 PDB header:hydrolase Chain: A: PDB Molecule:gtpase family protein; PDBTitle: crystal structure of yqeh gtpase from bacillus anthracis with dgdp2 bound 47 d1c0fa1 not modelled 10.2 20 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Actin/HSP70 48 d2plia1 not modelled 10.0 25 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 49 d2c35b1 not modelled 9.7 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 50 c2xoaA_ not modelled 9.7 31 PDB header:metal transport Chain: A: PDB Molecule:ryanodine receptor 1; PDBTitle: crystal structure of the n-terminal three domains of the2 skeletal muscle ryanodine receptor (ryr1) 51 c3qr5B_ not modelled 9.6 31 PDB header:signaling protein Chain: B: PDB Molecule:cardiac ca2+ release channel; PDBTitle: structure of the first domain of a cardiac ryanodine receptor mutant2 with exon 3 deleted 52 d2rk5a1 not modelled 9.5 20 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 53 d2etna2 not modelled 9.4 28 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 54 c2cqoA_ not modelled 9.0 23 PDB header:ribosome Chain: A: PDB Molecule:nucleolar protein of 40 kda; PDBTitle: solution structure of the s1 rna binding domain of human2 hypothetical protein flj11067 55 c1xzzA_ not modelled 8.9 38 PDB header:membrane protein Chain: A: PDB Molecule:inositol 1,4,5-trisphosphate receptor type 1; PDBTitle: crystal structure of the ligand binding suppressor domain of type 12 inositol 1,4,5-trisphosphate receptor 56 d2q3za2 not modelled 8.2 25 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 57 c1yz6A_ not modelled 8.2 20 PDB header:translation Chain: A: PDB Molecule:probable translation initiation factor 2 alpha PDBTitle: crystal structure of intact alpha subunit of aif2 from2 pyrococcus abyssi 58 d1q46a2 not modelled 8.1 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 59 c2z51A_ not modelled 7.8 14 PDB header:metal transport Chain: A: PDB Molecule:nifu-like protein 2, chloroplast; PDBTitle: crystal structure of arabidopsis cnfu involved in iron-2 sulfur cluster biosynthesis 60 d1hqia_ not modelled 7.2 22 Fold:Monooxygenase (hydroxylase) regulatory protein Superfamily:Monooxygenase (hydroxylase) regulatory protein Family:Monooxygenase (hydroxylase) regulatory protein 61 d1wi5a_ not modelled 7.2 24 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 62 d2asba1 not modelled 6.6 29 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 63 c2k52A_ not modelled 6.0 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mj1198; PDBTitle: structure of uncharacterized protein mj1198 from2 methanocaldococcus jannaschii. northeast structural3 genomics target mjr117b 64 d1kl9a2 not modelled 6.0 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 65 c3t8sA_ not modelled 5.7 38 PDB header:transport protein, membrane protein Chain: A: PDB Molecule:inositol 1,4,5-trisphosphate receptor type 1; PDBTitle: apo and insp3-bound crystal structures of the ligand-binding domain of2 an insp3 receptor 66 c2c35F_ not modelled 5.7 16 PDB header:polymerase Chain: F: PDB Molecule:dna-directed rna polymerase ii 19 kda PDBTitle: subunits rpb4 and rpb7 of human rna polymerase ii 67 d2bf5a1 not modelled 5.6 17 Fold:Monooxygenase (hydroxylase) regulatory protein Superfamily:Monooxygenase (hydroxylase) regulatory protein Family:Monooxygenase (hydroxylase) regulatory protein 68 d1gdta1 not modelled 5.5 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 69 d1jmxa3 not modelled 5.5 30 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 70 d2bf2a1 not modelled 5.5 17 Fold:Monooxygenase (hydroxylase) regulatory protein Superfamily:Monooxygenase (hydroxylase) regulatory protein Family:Monooxygenase (hydroxylase) regulatory protein 71 c3l6tB_ not modelled 5.3 42 PDB header:hydrolase Chain: B: PDB Molecule:mobilization protein trai; PDBTitle: crystal structure of an n-terminal mutant of the plasmid pcu1 trai2 relaxase domain 72 d1ttna1 not modelled 5.2 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 73 c1ttnA_ not modelled 5.2 14 PDB header:signaling protein Chain: A: PDB Molecule:dendritic cell-derived ubiquitin-like protein; PDBTitle: solution structure of the ubiquitin-like domain of human dc-2 ubp from dendritic cells 74 c2mobA_ not modelled 5.1 11 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (methane monooxygenase regulatory PDBTitle: methane monooxygenase component b 75 d2moba_ not modelled 5.1 11 Fold:Monooxygenase (hydroxylase) regulatory protein Superfamily:Monooxygenase (hydroxylase) regulatory protein Family:Monooxygenase (hydroxylase) regulatory protein