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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2cqoA_ | PDB header: ribosome | Chain: A: PDB Molecule: nucleolar protein of 40 kda; | PDBTitle: solution structure of the s1 rna binding domain of human2 hypothetical protein flj11067 |
Added to library: Tue Mar 16 12:00:15 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | G | S | S | G | S | S | G | M | N | S | G | R | P | E | T | M | E | N | L | P | A | L | Y | T | I | F | Q | G | E | V | A | M | V | T | D | Y | G | A | F | I | K | I | P | G | C | R | K | Q | G | L | V | H | R | T | H | M | S | S | C | R | V | D | K | P | S | E | I | V | D | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Sequence | G | D | K | V | W | V | K | L | I | G | R | E | M | K | N | D | R | I | K | V | S | L | S | M | K | V | V | N | Q | G | T | G | K | D | L | D | P | N | N | V | I | I | E | S | G | P | S | S | G | |||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | B | S | S | S | B | S | T | T | T | T | S |
Download: | PDB structure | FASTA sequence |
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