Return to main results Retrieve Phyre Job Id

Job DescriptionP69913
Confidence5.16%DateThu Jan 5 12:12:20 GMT 2012
Rank73Aligned Residues36
% Identity14%Templatec1ttnA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:dendritic cell-derived ubiquitin-like protein; PDBTitle: solution structure of the ubiquitin-like domain of human dc-2 ubp from dendritic cells
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50
Predicted Secondary structure 









Query SS confidence 



































Query Sequence  GDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQR
Query Conservation 

 
 
 
  
    




 

  
 
 
 

   
Alig confidence 



































Template Conservation       
 

   

   
 
    

  

  
   
Template Sequence  GYECQLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAA
Template Known Secondary structure 

STTT
TTST
Template Predicted Secondary structure 










Template SS confidence 



































   21........30.........40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions