Job Description P0A7Y4 Confidence 99.22% Date Thu Jan 5 11:06:28 GMT 2012 Rank 22 Aligned Residues 88 % Identity 27% Template c2opqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:reverse transcriptase/ribonuclease h; PDBTitle: crystal structure of l100i mutant hiv-1 reverse2 transcriptase in complex with gw420867x. Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	F	T	D	G	S	C	L	G	N	P	G	P	G	G	Y	G	A	I	L	R	Y	R	G	R	E	K	T	F	S	A	G	Y	T	R	T	T	N	N	R	M	E	L	M	A	A	I	V	A	L	E	A	L	K	E	H	C	E	V	I	L	S	T	D	S	Q	Y	V	R	Q	G	I	T	Q	W	I	H	N	W
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		T	F	Y	V	D	A	G	Y	V	T	N	R	G	R	Q	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	L	T	D	T	T	N	Q	K	T	E	L	Q	A	I	Y	L	A	L	Q	D	.	.	S	G	L	E	V	N	I	V	T	D	S	Q	Y	A	L	G	I	I	Q	A	Q	P	D	Q	S
Template Known Secondary structure												T	T	S		B			.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S																		.	.	S		S																	T			S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.															.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.			.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	R	G	W	K	T	A	D	K	K	P	V	K	N	V	D	L	W	Q	R	L	D	A	A	L	G	Q	H	Q	I	K	W	E	W	V	K
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	E	L	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	I	E	Q	L	I	K	K	E	K	V	Y	L	A	W	V	P
Template Known Secondary structure		S						.	.	.	.	.	.	.	.	.	.	.	.	.										S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		514	.	.	.	.	.														520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions