Job Description P39371 Confidence 47.21% Date Thu Jan 5 12:00:05 GMT 2012 Rank 67 Aligned Residues 298 % Identity 11% Template d2madh_ SCOP info 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Resolution UNK

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		38	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		N	D	T	V	Y	I	G	L	G	S	A	G	T	.	.	.	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T
Query Conservation															.	.	.
Alig confidence															.	.	.																	.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		G	R	R	S	Y	I	N	L	P	A	H	H	S	A	I	I	Q	Q	W	V	L	D	A	G	S	G	S	I	L	G	H	V	.	.	.	.	.	N	G	G	F	L	P	N	P	V	A	A	H	S	G	S	E	F	A	L	A	S	T	S	F	S	R	I	A	K	G	K	R	T	D	Y	V	E	V	F	D	P	V	T
Template Known Secondary structure		T	T								G	G	G		S									T	T	T	T							.	.	.	.	.				S	S							T	T	S	S										T	T	S	S	S	S											T	T	T
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.								.	.
Query SS confidence																				.	.	.	.	.	.								.	.
Query Sequence		N	S	W	V	K	L	M	S	H	A	P	M	G	M	A	G	H	V	.	.	.	.	.	.	T	F	V	H	N	G	K	.	.	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N	A	H	Y	F	D	K	K	A	E	D	Y	F	F	N
Query Conservation																				.	.	.	.	.	.								.	.
Alig confidence																				.	.	.	.	.	.								.	.
Template Conservation
Template Sequence		F	L	P	I	A	D	I	E	L	P	D	A	P	R	F	D	V	G	P	Y	S	W	M	N	A	N	T	P	N	N	A	D	L	L	F	F	Q	F	A	A	G	P	A	V	G	L	V	V	Q	G	G	S	S	D	D	Q	L	L	S	S	P	T	C	Y	H	I	H	P	G	A	P	S	T	F	Y	L	L	C	A	Q
Template Known Secondary structure					S						T	T						S				T	T	S	S				T	T	S	S	B							S	S	S							B	T	T	T	T	B									S			S					B	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																																																								.	.	.
Query SS confidence																			.	.	.	.	.																																																								.	.	.
Query Sequence		K	F	L	L	S	F	D	P	S	T	Q	Q	W	S	Y	A	G	.	.	.	.	.	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W	L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G	N	N	L	K	W	N	K	L	A	P	V	S	S	.	.	.
Query Conservation																			.	.	.	.	.																																																								.	.	.
Alig confidence																			.	.	.	.	.																									.	.	.	.	.	.	.																									.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		G	G	L	A	K	T	D	H	A	G	G	A	A	G	A	G	L	V	G	A	M	L	T	A	A	Q	N	L	L	T	Q	P	A	Q	A	N	K	S	G	R	I	V	W	P	V	Y	.	.	.	.	.	.	.	S	G	K	I	L	Q	A	D	I	S	A	A	G	A	T	N	K	A	P	I	D	A	L	S	G	G	R
Template Known Secondary structure		S									T	T											S		T	T	S				S						T	T	T	T							S	.	.	.	.	.	.	.	S	S									T	T										S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.								.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
								259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	D	G	V	A	G	G	F	A	G	I	S	N	D	S	L	I	F	A	G	G	A	G	F	K	G	S	R	E	N	Y	Q	N	G	K	N	Y	A	H	E	G	L	K	K	S	Y	S	T	D	I	H	L	W	H	N	G	K	W	D	K	S	G	E	L	S	Q	G	R	A	Y	G	V	S	L
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		K	A	D	T	W	R	P	G	G	W	Q	Q	V	A	Y	L	K	S	S	D	G	I	Y	L	L	T	S	E	Q	S	A	W	K	L	H	A	A	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	S	V	T	G	L	V	G	Q	T	S	S	Q	I	S	L	G	H	.	D	V	D	A	I	S	V
Template Known Secondary structure				T	T					S	S	S						T	T	T	T											T	T		T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T												.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.														300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.
		333	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		P	W	N	N	S	.	.	L	L	I	I	G	G	E	T	A	G	G	K	A	V	T	D	S	V	L	I	T	V	K	D	N	K	V	T	V	Q
Query Conservation							.	.
Alig confidence							.	.									.	.			.	.	.	.
Template Conservation																	.	.			.	.	.	.
Template Sequence		A	Q	D	G	G	P	D	L	Y	A	L	S	A	G	T	.	.	E	V	.	.	.	.	L	H	I	Y	D	A	G	A	G	D	Q	D	Q	S
Template Known Secondary structure			S	S	S	S								T	T	T	.	.	T		.	.	.	.						T	T	T
Template Predicted Secondary structure																	.	.			.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions