Job Description P39371 Confidence 14.71% Date Thu Jan 5 12:00:05 GMT 2012 Rank 97 Aligned Residues 209 % Identity 16% Template d1v0ea1 SCOP info 6-bladed beta-propeller Sialidases Endo-alpha-sialidase Resolution 1.9

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence		T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	.	.	.	.	.	.	.	N	P	K	T	N	S	W	V	K	L	M	S	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence									.																											.	.	.	.	.								.	.	.	.	.	.	.
Template Conservation									.																											.	.	.	.	.
Template Sequence		T	D	L	G	L	I	P	.	S	V	T	E	V	H	S	F	A	T	I	D	N	N	G	F	A	M	G	Y	H	Q	G	D	V	A	.	.	.	.	.	P	R	E	V	G	L	F	Y	F	P	D	A	F	N	S	P	S	N	Y	V	R	R	Q	I	P	S	E	Y	E	P	D	A	S	E	P	C	I	K	Y	Y	D
Template Known Secondary structure						S		T	.	T		S									S	S	S										S	S	S	.	.	.	.	.	S									T	T	T	T	T		T	T									G	G	G		T	T										T
Template Predicted Secondary structure									.																											.	.	.	.	.
Template SS confidence
		515	.	.	.	.	520	.		.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.						.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N	A	H	Y	F	D	K	K	A	E	D	Y	F	F	N	K	F	L	L	S	F	D	P	S	T	Q	Q	W	S	Y	A	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	L	Y	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	G	T	R	G	D	R	L	G	S	S	L	H	R	S	R	D	I	G	Q	T	W	E	S	L	R	F	P	H	N	V	H	H	T	T	L	P	F	A	K
Template Known Secondary structure		T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		T	T	S									S	S	T	T	S	S							T	T				S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		589	590	.	.	.	.																																		.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.																		.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query Sequence		K	G	D	K	T	W	L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	K	W	N	K	.	.	.	.	.	L	A	P	V	S	S	P	D	G	V	A	G	G	F	A	G	I	S	N	D	S	L	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation
Template Sequence		V	G	D	D	L	I	M	F	G	S	E	R	A	E	N	E	W	E	A	G	A	P	D	D	R	Y	K	A	S	Y	P	R	T	F	Y	A	R	L	N	V	N	N	W	N	A	D	D	I	E	W	V	N	I	T	D	Q	I	Y	Q	G	G	I	V	N	S	G	V	G	V	G	S	V	V	V	K	D	N	Y	I	Y
Template Known Secondary structure			T	T									S	S	T	T		S	S	T	T						S	S		B											T	T	T				T	T											B			S	S	S				S									T	T
Template Predicted Secondary structure
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
			276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	F	A	G	G	A	G	F	K	G	S	R	E	N	Y	Q	N	G	K	N	Y	A	H	E	G	L	K	K	S	Y	S	T	D	I	H	L	W	H
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		Y	M	F	G	G	E	D	H	F	N	P	W	T	Y	G	D	N	S	A	K	D	P	F	K	S	D	G	H	P	S	D	L	Y	C	Y	K	M	K
Template Known Secondary structure									S					T	T	T	T	T	T	T			T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		716	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions