Job Description P39371 Confidence 18.09% Date Thu Jan 5 12:00:05 GMT 2012 Rank 89 Aligned Residues 239 % Identity 10% Template d1npea_ SCOP info 6-bladed beta-propeller YWTD domain YWTD domain Resolution 2.30

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		N	D	T	V	Y	I	G	L	G	S	A	G	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	.	.	.	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T
Query Conservation																																																.	.	.
Alig confidence											.	.	.																																			.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.																																																.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	H	L	L	F	A	Q	T	.	.	.	G	K	I	E	R	L	P	L	E	R	N	T	M	K	K	T	E	A	K	A	F	L	H	I	P	A	K	V	I	I	G	L	A	F	D	C	V	D	K	V	V	Y	W	T	D	I	S	.	.	.	.	.	.	.	.	.	.	E	P	S	I	G	R	A	S	L	H	G
Template Known Secondary structure											.	.	.									S	S	S		B		G	G	G																			T	T	T	T							T	T	.	.	.	.	.	.	.	.	.	.	T	T							S	S	S
Template Predicted Secondary structure											.	.	.																																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		913	.	.	.	.	.	.	920	.				.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.											.	970	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	W	V	K	L	M	S	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N	A	H	Y	F	D	K	K	A	E	D	Y	F	F	N	K	F	L	L	S	F	D	P
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	P	T	T	I	I	R	Q	D	L	G	S	P	E	G	I	A	L	D	H	L	G	R	T	I	F	W	T	D	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	R	I	E	V	A	K	M
Template Known Secondary structure										T	T											T	T	T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T							T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.																																								.	.	.	.	.	.	.	.	1020
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	Q	Q	W	S	Y	A	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W	L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G	N	N	L	K	W	N	K	L	A	P	V	S	S	P	D	G	V	A	G	G	F	A	G	I	S	N	D	S	L
Query Conservation
Alig confidence																																			.	.	.	.																														.	.	.
Template Conservation																																			.	.	.	.																														.	.	.
Template Sequence		D	G	T	Q	R	R	V	L	F	D	T	G	L	V	N	P	R	G	I	V	T	D	P	V	R	G	N	L	Y	W	T	D	W	.	.	.	.	N	R	D	N	P	K	I	E	T	S	H	M	D	G	T	N	R	R	I	L	A	Q	D	N	L	G	L	P	N	.	.	.	G	L	T	F	D	A	F	S	S	Q	L
Template Known Secondary structure		T	S		S							S	S		S	S								T	T	T	T								.	.	.	.		S	S	S								T	T	S									T	T		S				.	.	.						T	T	T	T
Template Predicted Secondary structure																																			.	.	.	.																														.	.	.
Template SS confidence
		1021	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.					.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.				.	.	.	.	.	.	.	1090	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	A	G	G	A	G	F	K	G	S	R	E	N	Y	Q	N	G	K	N	Y	A	H	E	G	L	K	K	S	Y	S	T	D	I	H	L	W	H	N	G	K	W	D	K	S	G	E	L	S	Q	G	R	A	Y	G	V	S	L	P	W	N	N	S	L	L	I	I	G	G	E	T	A	G	G	K	A	V	T	D	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																						.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																						.	.	.	.	.	.
Template Sequence		C	W	V	D	A	G	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	E	C	L	N	P	A	Q	P	G	R	R	K	V	.	.	L	E	G	L	Q	Y	P	F	A	V	T	S	Y	G	K	N	L	Y	Y	T	D	.	.	.	.	.	.	W	K	T	N	S	V
Template Known Secondary structure						T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T								.	.						S								T	T							.	.	.	.	.	.	T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																						.	.	.	.	.	.
Template SS confidence
		1094	.	.	.	.	.	1100	.																							.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.			.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.							.	.	1140	.	.	.
		355	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	T	V	K	D	N	K	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	M	D	L	A	I	S	K	E	M
Template Known Secondary structure						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1144	.	.	.	.	.	1150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions