Job Description P39371 Confidence 48.09% Date Thu Jan 5 12:00:05 GMT 2012 Rank 66 Aligned Residues 264 % Identity 13% Template d1n1ta2 SCOP info 6-bladed beta-propeller Sialidases Sialidases (neuraminidases) Resolution 1.60

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																									.			.	.	.	.	.	.
Query SS confidence																																									.			.	.	.	.	.	.
Query Sequence		A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T	N	S	.	W	V	.	.	.	.	.	.	K	L	M	S	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I
Query Conservation																																									.			.	.	.	.	.	.
Alig confidence																																									.			.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	I	V	N	V	D	G	V	M	V	A	I	A	D	A	R	Y	E	T	S	F	D	N	S	F	I	E	T	A	V	K	Y	S	V	D	D	G	A	T	W	N	T	Q	I	A	I	K	N	S	R	A	S	S	V	S	R	V	M	D	A	T	V	I	V	K	G	N	K	L	Y	I	L	V	G	S	F	N	K	T
Template Known Secondary structure								T	T										S	S		S		S	S	S										S	S	T	T	S	S												S	S	T	T												T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																		.	.																	.	.	.	.	.
Query SS confidence																																		.	.																	.	.	.	.	.
Query Sequence		F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N	A	H	Y	F	D	K	K	A	E	D	.	.	Y	F	F	N	K	F	L	L	S	F	D	P	S	T	Q	Q	.	.	.	.	.	W	S	Y	A	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W
Query Conservation																																		.	.																	.	.	.	.	.
Alig confidence																																		.	.																	.	.	.	.	.									.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		R	N	S	W	T	Q	H	R	D	G	S	D	W	E	P	L	L	V	V	G	E	V	T	K	S	A	A	N	G	K	T	T	A	T	I	S	W	G	K	P	V	S	L	K	P	L	F	P	A	E	F	D	G	I	L	T	K	E	F	V	G	G	V	.	.	.	.	.	G	A	A	I	V	A	S	N	G	N	L	V
Template Known Secondary structure			S		G	G	G		S	S	S	T	T																T	T															G	G	G	S		S			T	T										S	.	.	.	.	.							T	T	S
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G	N	N	L	K	W	N	K	L	A	P	V	S	S	P	D	G	V	A	G	G	F	A	G	I	S	N	D	S	L	I	F	A	G	G	A	G	F	K	G	S	R	E	N	Y	Q	N	G	K	N	Y	A	H	E	G	L	K	K	S
Query Conservation
Alig confidence																					.																											.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																											.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	V	Q	I	A	D	M	G	G	R	V	F	T	K	I	M	Y	S	.	E	D	D	G	N	T	W	K	F	A	E	G	R	S	K	F	G	C	S	E	P	A	V	L	E	W	.	E	G	K	L	I	I	N	N	R	V	D	G	N	R	R	L	V	Y	E	S	S	D	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S										.	S	S	T	T	S	S					S					T	T										.	T	T									T	T	S								S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																											.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.														320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		Y	S	T	D	I	H	L	W	H	N	G	K	W	D	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	S	Q	G	R	A	Y	G	V	S	L	P	W	N	N	S	.	.	L	L	I	I	G	G	E	T	A	G	G	K	A	V	T	D	S	V	L	I	T	V	K	D	N	K	V	T	V	Q
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	M	G	K	T	W	V	E	A	L	G	T	L	S	H	V	W	T	N	S	P	T	S	N	Q	Q	D	C	Q	S	S	F	V	A	V	T	I	E	G	K	R	V	M	L	F	T	H	P	L	N	L	K	G	R	W	M	R	D	R	L	H	L	W	M	T	D	N	Q	R	I	F	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T	S	S					T	T	T	T	T	T	S			S	S	T	T	S		S													T	T												T	T		T	T			B	S								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions