Job Description P39371 Confidence 80.00% Date Thu Jan 5 12:00:05 GMT 2012 Rank 52 Aligned Residues 227 % Identity 15% Template c3g4hB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:regucalcin; PDBTitle: crystal structure of human senescence marker protein-30 (zinc bound) Resolution 1.92 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	T	V	Y	I	G	L	G	S	A	G	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T	N	S	W
Query Conservation
Alig confidence								.																							.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																							.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	S	L	L	F	.	V	D	I	P	A	K	K	V	C	R	W	D	S	F	T	K	Q	V	Q	R	V	T	.	.	.	.	.	M	D	A	P	V	S	S	V	A	L	R	Q	S	G	G	Y	V	A	T	I	G	.	.	.	.	.	.	.	.	.	.	.	.	T	K	F	C	A	L	N	W	K	E	Q	S	A
Template Known Secondary structure		T	T					.			T	T	T	T							T	T	T								.	.	.	.	.		S	S								B	T	T	S	S						T	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	T
Template Predicted Secondary structure								.																							.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		V	K	L	M	S	H	A	P	M	G	.	.	.	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N	A	H	Y	F	D	K	K	A	E	D	Y	F	F	N	K	F	L	L	S	F	D	P
Query Conservation												.	.	.
Alig confidence												.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	L	A	T	V	D	N	D	K	K	N	N	R	F	N	D	G	K	V	D	P	A	G	R	Y	F	A	G	T	M	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	P	A	V	L	E	R	H	Q	G	A	L	Y	S	L	F	P
Template Known Secondary structure									T	T		T	T										T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S					S									T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																													.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		S	T	Q	Q	W	S	Y	A	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W	L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G	N	N	L	K	W	N	.	.	.	K	L	A	P	V	S	S	P	D	G	V	A	G	G	F	A	G	I	S	N
Query Conservation																																																											.	.	.
Alig confidence														.	.	.																					.	.	.	.	.																		.	.	.
Template Conservation														.	.	.																					.	.	.	.	.
Template Sequence		D	H	H	V	K	K	Y	F	D	Q	V	D	.	.	.	I	S	N	G	L	D	W	S	L	D	H	K	I	F	Y	Y	I	D	S	L	.	.	.	.	.	S	Y	S	V	D	A	F	D	Y	D	L	Q	T	G	Q	I	S	N	R	R	S	V	Y	K	L	E	K	E	E	Q	I	P	D	G	M	C	I	D	A	E
Template Known Secondary structure		T	S										S	.	.	.	B								T	T	S								G	G	.	.	.	.	.	G	T									T	T	T														G	G	G										T	T
Template Predicted Secondary structure														.	.	.																					.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		D	S	L	I	F	A	G	G	A	G	F	K	G	S	R	E	N	Y	Q	N	G	K	N	Y	A	H	E	G	L	K	K	S	Y	S	T	D	I	H	L	W	H	N	G	K	W	D	K	S	G	E	L	S	Q	G	R	A	Y	G	V	S	L	.	.	P	W	N	N	S	L	L	I
Query Conservation																																																															.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	L	W	V	A	C	Y	N	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	I	R	L	D	P	V	T	G	K	R	L	Q	T	V	K	L	P	V	D	K	T	T	S	C	C	F	G	G	K	N	Y	S	E	M	Y	V
Template Known Secondary structure		S								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T										S	S	S	B								S	G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.																							.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions