Job Description P39371 Confidence 18.66% Date Thu Jan 5 12:00:05 GMT 2012 Rank 87 Aligned Residues 295 % Identity 11% Template c3fgbB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein q89zh8_bactn; PDBTitle: crystal structure of the q89zh8_bactn protein from2 bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr289b. Resolution 2.00 Å

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		40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		T	V	Y	I	G	.	.	L	G	S	A	G	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T	N	S	W
Query Conservation							.	.
Alig confidence							.	.																												.																															.	.	.	.
Template Conservation																																				.																															.	.	.	.
Template Sequence		T	X	I	V	G	T	Y	T	S	G	D	S	K	G	L	Y	S	F	R	F	N	E	E	N	G	T	A	T	A	L	S	E	A	E	.	V	E	N	P	S	Y	L	V	P	S	A	D	G	K	F	I	Y	A	V	S	E	F	S	N	E	Q	A	A	A	N	.	.	.	.	A	F	A	F	N	K	E	E	G	T	F
Template Known Secondary structure										S	S	S											T	T	T											.		S									S	S	S	S									S	S	T	T					.	.	.	.						T	T	T	T
Template Predicted Secondary structure																																				.																															.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	L	M	S	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N	A	H	Y	F	D	K	K	A	E	D	Y	F	F	N	K	F	L	L	S	F	D	P	S	T	Q
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		R	L	L	N	T	Q	K	T	G	G	E	D	P	C	Y	I	I	T	N	G	S	N	V	V	T	A	N	Y	S	G	G	S	I	.	.	S	V	F	P	I	D	K	D	G	S	L	L	P	A	S	E	V	V	K	F	K	G	S	G	A	D	K	E	R	Q	E	K	P	H	L	H	C	V	R	I	T	P	D	G	K
Template Known Secondary structure										S	S	S									S	S							T	T	T	T			.	.					B		T	T	S		B		S												S	S	T	T	T		S	S										T	T	S	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		198	.																																	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	A	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W	L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		Y	L	F	A	D	D	L	G	T	D	Q	I	H	K	F	I	V	N	P	N	A	K	A	D	N	E	D	V	F	L	K	E	G	S	P	A	S	Y	K	V	E	A	G	S	G	P	R	H	L	T	F	A	P	N	G	S	Y	A	Y	L	I	N	.	.	.	.	E	L	S	G	T	V	I	A	F	E	Y	N	D	G
Template Known Secondary structure								T	T	T	T									T	T			T	T	S				S													T	T										T	T	S	S							.	.	.	.	T	T	T										T	T
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	L	K	W	N	K	L	A	P	V	S	S	P	D	G	V	A	G	G	F	A	G	I	S	N	D	S	L	I	F	A	G	G	A	G	F	K	G	S	R	E	N	Y	Q	N	G	K	N	Y	A	H	E	G	L	K	K	S	Y	S	T	D	I	H	L	W	H	N	G	K	W	D	K	S	G	E	L	S	Q	G
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	K	E	I	Q	T	I	A	A	D	T	V	G	A	K	G	S	G	D	I	H	I	S	P	D	G	K	F	L	Y	A	S	N	R	L	K	A	D	G	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	S	I	H	P	E	N	G	X	L	T	K	V	G	Y	Q	L	T	G
Template Known Secondary structure											S		S	S												T	T	S	S								S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T												S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		R	A	Y	G	V	S	L	P	W	.	N	N	S	L	L	I	I	G	G	E	T	A	G	G	K	A	V	T	D	S	V	L	I	T	V	K	D	N	K	V	T	V
Query Conservation											.
Alig confidence											.														.	.	.
Template Conservation																									.	.	.
Template Sequence		I	H	P	R	N	F	I	I	T	P	N	G	K	Y	L	L	V	A	C	R	D	S	N	.	.	.	V	I	Q	V	Y	E	R	D	T	D	T	G	L	L	T	D
Template Known Secondary structure		S									T	T	S								T	T	T	T	.	.	.									T	T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350				.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions