Job Description P39371 Confidence 17.19% Date Thu Jan 5 12:00:05 GMT 2012 Rank 92 Aligned Residues 98 % Identity 11% Template c2w18A_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:partner and localizer of brca2; PDBTitle: crystal structure of the c-terminal wd40 domain of human2 palb2 Resolution 1.90 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	G	L	G	S	A	G	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T	N	S	W	V	K	L	M
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.										.	.
Template Sequence		L	F	I	V	L	S	P	V	F	Q	L	I	V	I	N	P	K	T	T	L	S	V	G	V	M	L	Y	C	L	P	P	G	Q	A	G	R	F	L	E	G	D	V	K	D	H	C	A	A	A	I	L	T	S	G	T	.	.	.	.	.	.	.	.	.	.	I	A	I	W	D	L	L	L	G	.	.	Q	C	T	A
Template Known Secondary structure																	T	T	T	T												T	T												T	T							T	T	S		.	.	.	.	.	.	.	.	.	.						T	T	T		.	.	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.											.	.	.	.	.	1130	.	.	.			.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	P	P	V	Q	H	W	S	F	V	K	W	S	G	T	D	S	H	L	L	A	G	Q	K	D	G	N	I	F
Template Known Secondary structure																S	S	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions