Job Description P39371 Confidence 99.96% Date Thu Jan 5 12:00:05 GMT 2012 Rank 9 Aligned Residues 272 % Identity 15% Template c2vpjA_ PDB info PDB header:protein-binding Chain: A: PDB Molecule:kelch-like protein 12; PDBTitle: crystal structure of the kelch domain of human klhl12 Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		N	D	T	V	Y	I	G	L	G	S	A	G	T	A	W	Y	.	.	.	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T
Query Conservation																		.	.	.
Alig confidence																		.	.	.																			.																																.	.	.
Template Conservation																																							.																																.	.	.
Template Sequence		N	E	V	L	L	V	V	G	G	F	G	S	Q	Q	S	P	I	D	V	V	E	K	Y	D	P	K	T	Q	E	W	S	F	L	P	S	I	T	.	R	K	R	R	Y	V	A	S	V	S	L	H	D	R	I	Y	V	I	G	G	Y	D	G	R	S	R	L	S	S	V	E	.	.	.	C	L	D	Y	T	A	D	E
Template Known Secondary structure													T	T	T											T	T	T	T									S	.	S			B	S							T	T								B		S	S		B						.	.	.				T	T			T
Template Predicted Secondary structure																																							.																																.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.														.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	S	W	V	K	L	M	S	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N	A	H	Y	F	D	K	K	A	E
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	V	W	Y	S	V	A	P	M	N	V	R	R	G	L	A	G	A	T	T	L	G	D	M	I	Y	V	S	G	G	F	D	G	S	R	R	H	T	S	M	E	R	Y	D	P	N	I	D	Q	W	S	M	L	G	D	M	Q	T	A	R	E	G	A	G	L	V	V	A	S	G	V	I	Y	C	L	G	G	Y	D
Template Known Secondary structure		T										S	S			B	S							T	T								B		S	S		B									T	T	T	T									S	S			B	S							T	T								B
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	F	F	N	K	F	L	L	S	F	D	P	S	T	Q	Q	W	S	Y	A	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W	L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G	N	N	L	K	W	N	K	L	A	P	V	S	S	P	D	G
Query Conservation
Alig confidence																											.																											.	.	.																							.	.
Template Conservation																											.																											.	.	.																							.	.
Template Sequence		G	L	N	I	L	N	S	V	E	K	Y	D	P	H	T	G	H	W	T	N	V	T	P	M	A	.	T	K	R	S	G	A	G	V	A	L	L	N	D	H	I	Y	V	V	G	G	F	D	G	T	A	H	.	.	.	L	S	S	V	E	A	Y	N	I	R	T	D	S	W	T	T	V	T	S	M	T	T	.	.	P
Template Known Secondary structure		S	S		B									T	T	T	T									S	.	S			B	S							T	T								B		S	S	S	B	.	.	.									T	T	T	T									S	S	.	.
Template Predicted Secondary structure																											.																											.	.	.																							.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460		.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.				.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.			.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	G	F	A	G	I	S	N	D	S	L	I	F	A	G	G	A	G	F	K	G	S	R	E	N	Y	Q	N	G	K	N	Y	A	H	E	G	L	K	K	S	Y	S	T	D	I	H	L	W	H	N	G	K	W	D	K	S	G	E	L	S	Q	G	R	A	Y	G	V	S	L	P	W	N	N
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	C	Y	V	G	A	T	V	L	R	G	R	L	Y	A	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	G	N	S	L	L	S	S	I	E	C	Y	D	P	I	I	D	S	W	E	V	V	T	S	M	G	T	Q	R	C	D	A	G	V	C	V	L	R	E
Template Known Secondary structure			B	S							T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		S	S	S	B									T	T	T	T														S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.																		.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions