Job Description P39371 Confidence 89.02% Date Thu Jan 5 12:00:05 GMT 2012 Rank 45 Aligned Residues 149 % Identity 19% Template c2cltB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:interstitial collagenase; PDBTitle: crystal structure of the active form (full-length) of human2 fibroblast collagenase. Resolution 2.67 Å

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		23	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																							.															.	.
Query SS confidence											.	.	.	.																																							.															.	.
Query Sequence		P	E	T	P	V	P	F	K	S	.	.	.	.	G	T	G	A	I	D	N	D	T	V	Y	I	G	L	G	S	A	G	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	.	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	.	.	D	G	N	L	Y	V	F	G	G	I	G	K
Query Conservation											.	.	.	.																																							.															.	.
Alig confidence											.	.	.	.																.	.	.																					.															.	.										.	.	.
Template Conservation																														.	.	.																																															.	.	.
Template Sequence		P	Q	T	P	K	A	C	D	S	K	L	T	F	D	A	I	T	T	I	R	G	E	V	M	F	F	K	D	.	.	.	R	F	Y	M	R	T	N	P	F	Y	P	E	V	E	L	N	F	I	S	V	F	W	P	Q	L	P	N	G	L	E	A	A	Y	E	F	A	D	R	D	E	V	R	F	F	K	G	.	.	.
Template Known Secondary structure							T	T		T	T				S						T	T							T	.	.	.	T							S	S	S												S	T	T			S	S								G	G	G	T							T	.	.	.
Template Predicted Secondary structure																														.	.	.																																															.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.														.	.	.
Query SS confidence																														.	.	.	.	.														.	.	.
Query Sequence		N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T	N	S	W	V	K	L	M	S	H	.	.	.	.	.	A	P	M	G	M	A	G	H	V	T	F	V	H	.	.	.	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A
Query Conservation																														.	.	.	.	.														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																				.	.	.	.	.														.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	K	Y	W	A	V	Q	G	Q	N	V	L	H	G	Y	P	K	D	I	Y	S	S	F	G	F	P	R	T	V	K	H	I	D	A	A	L	S	E	E	N	T	G	K	T	Y	F	F	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T							T	T				T	T		S							S				T	T					S						T	T	T								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.
Query Sequence		I	D	K	I	N	A	H	Y	F	D	K	K	A	E	D	Y	F	F	N	K	F	L	L	S	F	D	P	S	T	Q	Q	W	S	Y	A	.	.	.	.	.	.	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W	L	I	N	G
Query Conservation																																					.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	Y	W	R	Y	D	E	Y	K	R	S	M	D	P	G	Y	P	K	M	I	A	H	D	F	P	G	I	G	H	K	V	D	A	V	F	M	K	D	G	F	F	Y	F	F	H	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	T	T				S	S									S	T	T	S		S			S						S	S							T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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