Job Description P39371 Confidence 85.04% Date Thu Jan 5 12:00:05 GMT 2012 Rank 49 Aligned Residues 157 % Identity 12% Template c1nr0A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:actin interacting protein 1; PDBTitle: two seven-bladed beta-propeller domains revealed by the2 structure of a c. elegans homologue of yeast actin3 interacting protein 1 (aip1). Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		L	P	E	T	P	V	P	F	K	S	G	T	G	A	I	D	.	.	.	N	D	T	V	Y	I	G	L	G	S	A	G	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E
Query Conservation																		.	.	.
Alig confidence																		.	.	.									.	.																			.				.	.																										.	.
Template Conservation																													.	.																			.				.	.																										.	.
Template Sequence		F	P	S	L	P	R	T	A	R	G	T	A	V	V	L	G	N	T	P	A	G	D	K	I	Q	Y	C	.	.	N	G	T	S	V	Y	T	V	P	V	G	S	L	T	D	T	E	I	.	Y	T	E	.	.	H	S	H	Q	T	T	V	A	K	T	S	P	S	G	Y	Y	C	A	S	G	D	V	H	G	N	.	.
Template Known Secondary structure										T	T									T	T	S	S						.	.		T	T							T	T		S	S					.				.	.		S	S									T	T	S	S							T	T	S		.	.
Template Predicted Secondary structure																													.	.																			.				.	.																										.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T	N	S	W	V	K	L	M	S	.	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N	A	H	Y	F	D
Query Conservation																										.
Alig confidence		.	.	.	.	.	.	.	.																	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	R	I	W	D	T	T	Q	T	T	H	I	L	K	T	T	I	P	V	F	S	G	P	V	K	D	I	S	W	D	S	E	S	K	R	I	A	A	V	G	E	G	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.						S	S	S	T	T										S	S	S									T	T	S										S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	E	D	Y	F	F	N	K	F	L	L	S	F	D	P	S	T	Q	Q	W	S	Y	A	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W	L	I	N	G	E	A	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	R	F	G	H	V	F	L	F	D	T	G	T	S	N	G	N	L	T	G	Q	A	R	A	M	N	S	V	D	F	K	P	S	R	P	F	R	I	I	S	G	S	D	D	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		S						T	T	T			B		B						S	S									S	S	S	S								T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions