Job Description P76221 Confidence 1.10% Date Thu Jan 5 12:20:46 GMT 2012 Rank 68 Aligned Residues 151 % Identity 10% Template c3rkoM_ PDB info PDB header:oxidoreductase Chain: M: PDB Molecule:nadh-quinone oxidoreductase subunit m; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		T	L	I	I	L	L	F	A	M	L	L	A	W	A	L	L	P	G	V	H	E	F	I	N	R	S	V	A	A	F	A	A	V	D	Q	Q	G	I	E	R	F	I	Q	S	Y	G	A	L	A	A	V	V	S	F	L	L	M	I	L	Q	A	I	A	A	P	L	P	A	F	L	.	.	I	T	F	A	N	A	S	L
Query Conservation																																																																								.	.
Alig confidence																																																																.								.	.
Template Conservation																																																																.
Template Sequence		A	Y	Q	G	A	V	I	Q	M	I	A	H	G	L	S	A	A	G	L	F	I	L	C	G	Q	L	Y	E	R	I	H	T	R	D	M	R	M	M	G	G	L	W	S	K	M	K	W	L	P	A	L	S	L	F	F	A	V	A	T	L	G	M	.	P	G	T	G	N	F	V	G	E	F	M	I	L	F	G	S	F
Template Known Secondary structure																																			B	G	G	G			S	G	G	G	T		S	S													S			.	T	T	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	A	F	W	G	G	L	L	S	W	T	S	S	M	A	G	A	A	L	C	F	F	I	A	R	V	M	G	R	E	V	V	E	K	L	T	G	K	T	V	L	D	S	M	D	G	F	F	T	R	Y	G	K	H	T	I	L	V	C	R	L	L	P	F	V	P	F	D	P	I	S	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	V	P	V	I	T	V	I	S	T	F	G	L	V	F	A	S	V	Y	S	L	A	M	L	H	R	A	Y	F	G	K	A	K	S	Q	I	A	S	Q	E	L	P	G	M	S	L	R	E	L	F	M	I	L	L	L	V	V	L	L	V	L	L	G	F	Y	P	Q	P	I	L	D	T	S
Template Known Secondary structure																															S	S	S	S		S	S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions