Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGG2
Confidence29.78%DateThu Jan 5 11:29:03 GMT 2012
Rank132Aligned Residues26
% Identity8%Templatec4a11B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:dna excision repair protein ercc-8; PDBTitle: structure of the hsddb1-hscsa complex
Resolution3.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   261........270.........280......
Predicted Secondary structure 





Query SS confidence 

























Query Sequence  VRGEFYTQDGVLVASTVQEGVMRNHN
Query Conservation      
 
  
 



  
  
 
   
Alig confidence 

























Template Conservation 
  
  
 
   
 
 
 

 
 

 
Template Sequence  VDCCVFQSNFQELYSGSRDCNILAWV
Template Known Secondary structure  TTTTTTS
Template Predicted Secondary structure 








Template SS confidence 

























   337..340.........350.........360..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions