Job Description P0AGG2 Confidence 100.00% Date Thu Jan 5 11:29:03 GMT 2012 Rank 3 Aligned Residues 253 % Identity 22% Template c3rqbB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of conserved protein of unknown function with hot2 dog fold from alicyclobacillus acidocaldarius Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		M	S	Q	A	L	K	N	L	L	T	L	L	N	L	E	K	I	E	E	G	L	F	R	G	Q	S	E	.	.	D	L	G	L	R	Q	V	F	G	G	Q	V	V	G	Q	A	L	Y	A	A	K	E	T	V	P	E	E	R	L	V	H	S	F	H	S	Y	F	L	R	P	G	D	S	K	K	P	I	I	Y	D	V
Query Conservation																													.	.
Alig confidence									.	.	.						.												.	.																																													.
Template Conservation									.	.	.						.																																																										.
Template Sequence		V	T	H	A	F	D	D	.	.	.	A	T	A	L	S	.	F	D	G	R	Q	F	H	G	Q	V	K	A	E	Y	Y	N	X	V	G	P	F	G	G	I	T	A	A	T	X	L	K	A	A	X	S	H	P	E	R	L	G	Q	P	L	A	L	T	V	N	F	A	A	P	A	K	V	A	.	P	F	V	I	E	A
Template Known Secondary structure									.	.	.		T				.			S	S								G	G	G	B		S	S	S	B															T		T	T			S										S	S				S	S	.
Template Predicted Secondary structure									.	.	.						.																																																										.
Template SS confidence
		5	.	.	.	.	10	.				.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		E	T	L	R	D	G	N	S	F	S	A	R	R	V	A	A	I	Q	N	G	K	P	I	F	Y	M	T	A	S	F	Q	A	P	E	A	G	F	E	H	Q	K	.	T	M	P	S	A	P	A	P	D	G	L	P	S	E	T	Q	I	A	Q	S	L	A	H	L	L	P	P	V	L	K	D	K	F	I	C	D	R	P
Query Conservation																																											.
Alig confidence																																											.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	V	R	T	N	R	S	T	Q	H	F	T	L	T	X	X	Q	D	G	E	V	V	T	T	A	T	A	V	F	G	I	R	R	E	S	W	S	H	T	E	A	V	X	P	D	V	P	P	P	A	D	V	P	R	F	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	P	L	P	W	X	Q	W
Template Known Secondary structure								S	S											T	T																						S								T	T	T	S		B				.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			G	G	G	G	G
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.														.	.	140	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	R	P	V	E	F	H	N	P	L	K	G	H	V	A	E	P	H	R	Q	V	W	I	R	A	N	G	S	V	P	D	D	L	R	V	H	Q	Y	L	L	G	Y	A	S	D	L	N	F	L	P	V	A	L	Q	P	H	G	I	G	F	L	E	P	G	I	Q	I	A	T	I	D	H	S	M	W	F	H	R
Query Conservation
Alig confidence																.	.																			.	.	.	.											.	.	.	.	.	.
Template Conservation																.	.																			.	.	.	.											.	.	.	.	.	.
Template Sequence		Y	H	V	R	L	I	R	G	S	A	F	D	E	V	.	.	Q	D	A	T	T	Y	Q	W	X	R	D	D	P	P	R	P	L	D	.	.	.	.	H	A	A	L	A	A	L	C	D	T	.	.	.	.	.	.	F	V	P	R	V	Y	V	K	L	K	R	P	V	P	I	G	T	V	T	F	T	V	Y	F	L	A
Template Known Secondary structure											S	S	S			.	.		S	S									S	S						.	.	.	.								T	T		.	.	.	.	.	.	S									S	S															S
Template Predicted Secondary structure																.	.																			.	.	.	.											.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		238	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		P	F	N	L	.	.	.	.	.	N	E	W	L	L	Y	S	V	E	S	T	S	A	S	S	A	R	G	F	V	R	G	E	F	Y	T	Q	D	G	V	L	V	A	S	T	V	Q	E	G	V	M	R
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.
Template Conservation
Template Sequence		D	P	E	T	I	F	R	Q	G	T	N	E	L	L	G	V	A	R	A	T	G	F	S	H	G	Y	F	D	Q	I	G	E	V	W	S	Q	D	G	D	L	L	A	T	T	T	Q	L	V	Y	X	K
Template Known Secondary structure									T	T	T														T	T											T	T	S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions