Job Description P0AGG2 Confidence 98.66% Date Thu Jan 5 11:29:03 GMT 2012 Rank 22 Aligned Residues 104 % Identity 20% Template c3lwgB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:hp0420 homologue; PDBTitle: crystal structure of hp0420-homologue c46a from helicobacter2 felis Resolution 1.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.																								.
Query SS confidence																				.	.	.	.	.																								.
Query Sequence		L	N	L	E	K	I	E	E	G	L	F	R	G	Q	S	E	D	L	.	.	.	.	.	G	L	R	Q	V	F	G	G	Q	V	V	G	Q	A	L	Y	A	A	K	E	T	V	P	.	E	E	R	L	V	H	S	F	H	S	Y	F	L	R	P	G	D	S	K	K	P	I	I	Y	D	V	E	T	L	R	D	G	N
Query Conservation																				.	.	.	.	.																								.
Alig confidence																				.	.	.	.	.																								.
Template Conservation
Template Sequence		A	E	L	I	S	F	G	S	G	K	A	T	V	C	L	T	P	K	E	F	M	L	A	E	D	D	V	V	H	A	G	F	I	V	G	A	A	S	F	A	A	L	C	A	L	N	K	K	N	S	L	I	S	S	M	K	V	N	L	L	A	P	I	E	I	K	Q	E	I	Y	F	N	A	T	I	T	H	T	S	S
Template Known Secondary structure									T	T										G	G	G				T	T																						T	T												S				T	T														S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	S	A	R	R	V	A	A	I	Q	N	G	K	P	I	F	Y	M	T	A	S	F	Q	A	P	E	A	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	S	T	I	R	V	E	G	E	F	M	E	I	K	V	F	E	G	D	F	E	I	L	V	F	E	K	R	P
Template Known Secondary structure		S											T	T														S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions